RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZNF789Q5FWF6 425 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CTSL3PQ5NE16 218 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 RNF187Q5TA31 235 aaPredicted RBP18.15■□□□□ 0.5
USP39-209ENST00000458268 OTOAQ7RTW8 1153 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 GPR155Q7Z3F1 870 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 TAX1BP1Q86VP1 789 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 AMIGO1Q86WK6 493 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 DENND6AQ8IWF6 608 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 UNC5BQ8IZJ1 945 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CACNA2D3Q8IZS8 1091 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 AGGF1Q8N302 714 aaeCLIP18.15■□□□□ 0.5
USP39-209ENST00000458268 UBXN4Q92575 508 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 CFAP36Q96G28 342 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 SIGLEC10Q96LC7 697 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 PWWP2AQ96N64 755 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 RUNDC3BQ96NL0 473 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 TEFMQ96QE5 360 aaKnown RBP18.15■□□□□ 0.5
USP39-209ENST00000458268 ULBP3Q9BZM4 244 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 RAB33BQ9H082 229 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 P2RY12Q9H244 342 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 PRORYQ9H606 182 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 SIDT1Q9NXL6 827 aaKnown RBP18.15■□□□□ 0.5
USP39-209ENST00000458268 LNPEPQ9UIQ6 1025 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 ICKQ9UPZ9 632 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 PCDHGA3Q9Y5H0 932 aa18.15■□□□□ 0.5
USP39-209ENST00000458268 TOX3O15405 576 aaPredicted RBP18.14■□□□□ 0.49
USP39-209ENST00000458268 STK17BO94768 372 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 PVRP15151 417 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 NELFEP18615 380 aaKnown RBP18.14■□□□□ 0.49
USP39-209ENST00000458268 OGNP20774 298 aaKnown RBP18.14■□□□□ 0.49
USP39-209ENST00000458268 AOAHP28039 575 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 VAC14Q08AM6 782 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 LONRF1Q17RB8 773 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 CNSTQ6PJW8 725 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 TRIM73Q86UV7 250 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 LRRC6Q86X45 466 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 TBC1D21Q8IYX1 336 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 SLC22A15Q8IZD6 547 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 C2orf73Q8N5S3 287 aaPredicted RBP18.14■□□□□ 0.49
USP39-209ENST00000458268 LMNTD1Q8N9Z9 388 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.14■□□□□ 0.49
USP39-209ENST00000458268 LPGAT1Q92604 370 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 SLCO2A1Q92959 643 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 CCDC68Q9H2F9 335 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 FBXO8Q9NRD0 319 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 IARS2Q9NSE4 1012 aaKnown RBP18.14■□□□□ 0.49
USP39-209ENST00000458268 ACSL6Q9UKU0 697 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 CHMP2BQ9UQN3 213 aa18.14■□□□□ 0.49
USP39-209ENST00000458268 SLC9B1P1A6NJY1 282 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 EFCAB8A8MWE9 144 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 KIAA0754O94854 1291 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 FOLR1P15328 257 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 ZNF28P17035 718 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 PGAM1P18669 254 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 RPS3P23396 243 aaKnown RBP eCLIP18.13■□□□□ 0.493e-13■■■■□ 26.3
USP39-209ENST00000458268 ACADLP28330 430 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 SLC1A2P43004 574 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 MAGEA3P43357 314 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 BDKRB1P46663 353 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 ITGA8P53708 1063 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 MPP1Q00013 466 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 GPR19Q15760 415 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 TYSND1Q2T9J0 566 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 MSS51Q4VC12 460 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 HSP90AA5PQ58FG0 334 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 KIAA1614Q5VZ46 1190 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 SYDE1Q6ZW31 735 aaPredicted RBP18.13■□□□□ 0.49
USP39-209ENST00000458268 CENPUQ71F23 418 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 KCNMB4Q86W47 210 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 CILP2Q8IUL8 1156 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 OR5K2Q8NHB8 316 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 KLHL6Q8WZ60 621 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 C16orf45Q96MC5 204 aaPredicted RBP18.13■□□□□ 0.49
USP39-209ENST00000458268 CD180Q99467 661 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 DPH5Q9H2P9 285 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 TFB2MQ9H5Q4 396 aaKnown RBP18.13■□□□□ 0.49
USP39-209ENST00000458268 PDE7BQ9NP56 450 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 PPANQ9NQ55 473 aaKnown RBP18.13■□□□□ 0.49
USP39-209ENST00000458268 ACTR10Q9NZ32 417 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 POLG2Q9UHN1 485 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 POMT2Q9UKY4 750 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 RARRES3Q9UL19 164 aa18.13■□□□□ 0.49
USP39-209ENST00000458268 ZFYVE26Q68DK2 2539 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 ZCWPW2A0A1B0GU75 182 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 PIPSLA2A3N6 862 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 C2orf74A8MZ97 194 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 ISM1B1AKI9 464 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 USP1O94782 785 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 ZBTB11O95625 1053 aaPredicted RBP18.12■□□□□ 0.49
USP39-209ENST00000458268 PKMP14618 531 aaKnown RBP18.12■□□□□ 0.49
USP39-209ENST00000458268 SHMT2P34897 504 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 ETF1P62495 437 aaKnown RBP18.12■□□□□ 0.49
USP39-209ENST00000458268 HSD11B2P80365 405 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 CRYMQ14894 314 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 TMTC4Q5T4D3 741 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 UNC5AQ6ZN44 842 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 PPP1R3BQ86XI6 285 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 SPNS2Q8IVW8 549 aa18.12■□□□□ 0.49
USP39-209ENST00000458268 NLGN4XQ8N0W4 816 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms