RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MANBAO00462 879 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 SOCS2O14508 198 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 INPP4BO15327 924 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 TYRP14679 529 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 PTPN2P17706 415 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 RPL5P46777 297 aaKnown RBP16.32■□□□□ 0.2
CCDC43-202ENST00000457422 GNPDA1P46926 289 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 GJA8P48165 433 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 APOFQ13790 326 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 ZNF77Q15935 545 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 CYP51A1Q16850 503 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 AAK1Q2M2I8 961 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 SLC5A9Q2M3M2 681 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 GGTA1PQ4G0N0 100 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 ARHGAP15Q53QZ3 475 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 PLEKHS1Q5SXH7 462 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 LRRC70Q7Z2Q7 622 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 MRPL43Q8N983 215 aaKnown RBP16.32■□□□□ 0.2
CCDC43-202ENST00000457422 OR8J3Q8NGG0 315 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 PARVBQ9HBI1 364 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 DUS2Q9NX74 493 aaKnown RBP16.32■□□□□ 0.2
CCDC43-202ENST00000457422 ARL15Q9NXU5 204 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 TBC1D14Q9P2M4 693 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 ZNF490Q9ULM2 529 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-202ENST00000457422 USP22Q9UPT9 525 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 NEUROG3Q9Y4Z2 214 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
CCDC43-202ENST00000457422 CLDN9O95484 217 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 CLPTM1O96005 669 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 TFAP2AP05549 437 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 ATP1B2P14415 290 aaPredicted RBP16.31■□□□□ 0.2
CCDC43-202ENST00000457422 NCK1P16333 377 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 EPORP19235 508 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 HRH2P25021 359 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 PEX19P40855 299 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 CCT8P50990 548 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 DGKQP52824 942 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 DCDC1P59894 354 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 SP140Q13342 867 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 NHSL2Q5HYW2 709 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 UBE2R2Q712K3 238 aaPredicted RBP16.31■□□□□ 0.2
CCDC43-202ENST00000457422 EPHX4Q8IUS5 362 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 ASB11Q8WXH4 323 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 NCSTNQ92542 709 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 ZBTB18Q99592 522 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 C9orf16Q9BUW7 83 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 ANKRD60Q9BZ19 345 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 LRTM1Q9HBL6 345 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 MARK1Q9P0L2 795 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 MAGEL2Q9UJ55 1249 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 SLC16A5O15375 505 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 RHOP08100 348 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 CYP2A6P11509 494 aaPredicted RBP16.31■□□□□ 0.2
CCDC43-202ENST00000457422 SOX11P35716 441 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 SLC6A12P48065 614 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 HNMTP50135 292 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 HMGCS1Q01581 520 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 PLA2G4EQ3MJ16 856 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 SGO1Q5FBB7 561 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 LY6G5CQ5SRR4 150 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 CACHD1Q5VU97 1274 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 TMEM215Q68D42 235 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 TBC1D21Q8IYX1 336 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 RGL4Q8IZJ4 473 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 SLC13A3Q8WWT9 602 aa16.31■□□□□ 0.2
CCDC43-202ENST00000457422 RPF2Q9H7B2 306 aaKnown RBP16.31■□□□□ 0.2
CCDC43-202ENST00000457422 NFKBIL1Q9UBC1 381 aaPredicted RBP16.31■□□□□ 0.2
CCDC43-202ENST00000457422 EME2A4GXA9 379 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-202ENST00000457422 KPNA5O15131 536 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 KRT6AP02538 564 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 KRT6BP04259 564 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 C7P10643 843 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 TCF3P15923 654 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 VIPR1P32241 457 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 RECQLP46063 649 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-202ENST00000457422 KRT6CP48668 564 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 PTGR1Q14914 329 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 ATP6AP1Q15904 470 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 IMPG1Q17R60 797 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 CNPY1Q3B7I2 92 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 SPRED1Q7Z699 444 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 FRS2Q8WU20 508 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 CYB5D2Q8WUJ1 264 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 OTUB2Q96DC9 234 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 PPM1MQ96MI6 270 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 HEPHQ9BQS7 1158 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 C1orf109Q9NX04 203 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 ERVW-1Q9UQF0 538 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 ARHGAP10A1A4S6 786 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 SAC3D1A6NKF1 404 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 GFYI3L273 518 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 TPST1O60507 370 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 KCNH1O95259 989 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 PGM3O95394 542 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 IL6P05231 212 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 HOXA9P31269 272 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 AKT1P31749 480 aa16.3■□□□□ 0.2
CCDC43-202ENST00000457422 CTNNB1P35222 781 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms