RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RHOCP08134 193 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 DSG3P32926 999 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 OGDHQ02218 1023 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 GRSF1Q12849 480 aaKnown RBP eCLIP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MERTKQ12866 999 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 RAB31Q13636 194 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 GNMTQ14749 295 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ALG10BQ5I7T1 473 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF709Q8N972 641 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CELF4Q9BZC1 486 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 OAS3Q9Y6K5 1087 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 COL14A1Q05707 1796 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 A0A1W2PPW3 197 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 EFCAB7A8K855 629 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ATP6V1G2-DDX39BF2Z307 99 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ACADMP11310 421 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MMP8P22894 467 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 OR1E1P30953 314 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CRISP3P54108 245 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 STXBP1P61764 594 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CBWD3Q5JTY5 395 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CBWD5Q5RIA9 395 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 KIAA0930Q6ICG6 404 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 KCNT2Q6UVM3 1135 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 LRRC70Q7Z2Q7 622 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 SNX20Q7Z614 316 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 TMCO2Q7Z6W1 182 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MARVELD2Q8N4S9 558 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CCDC54Q8NEL0 328 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 OR5K1Q8NHB7 308 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 KCNMB3Q9NPA1 279 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF224Q9NZL3 707 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ARMCX1Q9P291 453 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 PRDM4Q9UKN5 801 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 TNRC6CQ9HCJ0 1690 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 TUBAL3A6NHL2 446 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CLDN11O75508 207 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BCAS2O75934 225 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 HGFP14210 728 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 KITLGP21583 273 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 PITPNBP48739 271 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 RAB5CP51148 216 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 POLR2JP52435 117 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 RHOAP61586 193 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 PHC1P78364 1004 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ABATP80404 500 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BTKQ06187 659 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MZT1Q08AG7 82 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 SLC1A5Q15758 541 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 GPR33Q49SQ1 333 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 GCNT6Q5T4J0 391 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 FAM162BQ5T6X4 162 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 HAGHLQ6PII5 290 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 LIPT1Q9Y234 373 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 NME7Q9Y5B8 376 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 NR2E3Q9Y5X4 410 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 DISC1C4P0D8 188 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 HOXC12P31275 282 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 NSG1P42857 185 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 THOP1P52888 689 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 GBX2P52951 348 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TBX4P57082 545 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 IRF8Q02556 426 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ABRAXAS2Q15018 415 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SLC14A2Q15849 920 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 HID1Q8IV36 788 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DNAJC22Q8N4W6 341 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 VANGL1Q8TAA9 524 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 RASGRP4Q8TDF6 673 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF285Q96NJ3 590 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ETNK2Q9NVF9 386 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 FLRT1Q9NZU1 646 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PRR14LQ5THK1 2151 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PLIN4Q96Q06 1357 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TRIM64A6NGJ6 449 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LRRN3E7EW58 273 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ACOX3O15254 700 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PEX11AO75192 247 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SEC14L2O76054 403 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SNAPINO95295 136 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 STAU1O95793 577 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LTFP02788 710 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PRH1P02810 166 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TXNP10599 105 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PKMP14618 531 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 HOXA13P31271 388 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DLSTP36957 453 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DNAJB13P59910 316 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 AP5B1Q2VPB7 878 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SLC25A52Q3SY17 297 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 C15orf52Q6ZUT6 534 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CREB3L2Q70SY1 520 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 CHST9Q7L1S5 443 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 TOMM5Q8N4H5 51 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 STYXQ8WUJ0 223 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 DNAJC1Q96KC8 554 aaKnown RBP5.13□□□□□ -1.59
CSMD3-204ENST00000455883 SEPHS2Q99611 448 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 ZYG11BQ9C0D3 744 aa5.13□□□□□ -1.59
CSMD3-204ENST00000455883 LACRTQ9GZZ8 138 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms