RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 BORAQ6PGQ7 559 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 METTL25Q8N6Q8 603 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 SLC13A3Q8WWT9 602 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 PPM1MQ96MI6 270 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 TRIM4Q9C037 500 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 ZDHHC6Q9H6R6 413 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 PARVBQ9HBI1 364 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 LRTM1Q9HBL6 345 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 PDE10AQ9Y233 779 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 CCL26Q9Y258 94 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 MYRFQ9Y2G1 1151 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 FFAR3O14843 346 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 GPR42O15529 346 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 KRT6AP02538 564 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 KRT6BP04259 564 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 UGT2B4P06133 528 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 MPC1LP0DKB6 136 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 PABPC1P11940 636 aaKnown RBP14.75□□□□□ -0.05
LDLR-202ENST00000455727 KRT6CP48668 564 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 HNMTP50135 292 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 OR4D2P58180 307 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 SEMG2Q02383 582 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 GGTA1PQ4G0N0 100 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 CWF19L1Q69YN2 538 aaKnown RBP14.75□□□□□ -0.05
LDLR-202ENST00000455727 LRRC70Q7Z2Q7 622 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 RGL4Q8IZJ4 473 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 NSMCE2Q96MF7 247 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 FARSBQ9NSD9 589 aaKnown RBP14.75□□□□□ -0.05
LDLR-202ENST00000455727 SMOXQ9NWM0 555 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 ARL15Q9NXU5 204 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 IRAK3Q9Y616 596 aa14.75□□□□□ -0.05
LDLR-202ENST00000455727 FAM149AA5PLN7 773 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 KPNA5O15131 536 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SLC16A5O15375 505 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 BNIP3LO60238 219 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 TPST1O60507 370 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 TULP3O75386 442 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 ATP6V1B1P15313 513 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 ZNF30P17039 623 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 CALRP27797 417 aaKnown RBP14.74□□□□□ -0.05
LDLR-202ENST00000455727 CCR2P41597 374 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 IMPG1Q17R60 797 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SLC5A9Q2M3M2 681 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 PLEKHS1Q5SXH7 462 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 BRAT1Q6PJG6 821 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 GDPD4Q6W3E5 623 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 TSPAN14Q8NG11 270 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 DNAJB8Q8NHS0 232 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 HM13Q8TCT9 377 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 OSCP1Q8WVF1 389 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 ASB11Q8WXH4 323 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 GTF2H4Q92759 462 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 CCDC115Q96NT0 180 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 DPY30Q9C005 99 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 VCX3AQ9NNX9 186 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 C1orf109Q9NX04 203 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 PKD2L2Q9NZM6 624 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 B4GALT6Q9UBX8 382 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 ZNF639Q9UID6 485 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SLCO3A1Q9UIG8 710 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 TMPRSS11EQ9UL52 423 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 OAZ3Q9UMX2 235 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 AP3M1Q9Y2T2 418 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 NEUROG3Q9Y4Z2 214 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 RNF103-CHMP3A0A140T963 221 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SOBPA7XYQ1 873 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 VILLO15195 856 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 CCL16O15467 120 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SEC22BO75396 215 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 OR6B1O95007 311 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 LDLRP01130 860 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 CDH1P12830 882 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 EPORP19235 508 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 MYF6P23409 242 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 PLOD1Q02809 727 aaPredicted RBP14.74□□□□□ -0.05
LDLR-202ENST00000455727 MERTKQ12866 999 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SP140Q13342 867 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 PTGR1Q14914 329 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 RFLNAQ6ZTI6 216 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 UBE2R2Q712K3 238 aaPredicted RBP14.74□□□□□ -0.05
LDLR-202ENST00000455727 RALGPS2Q86X27 583 aaPredicted RBP14.74□□□□□ -0.05
LDLR-202ENST00000455727 RIMKLAQ8IXN7 391 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 KLHL23Q8NBE8 558 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 BPIFB1Q8TDL5 484 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SLC22A17Q8WUG5 538 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 IRF7Q92985 503 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 SH3GL1Q99961 368 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 RBM38Q9H0Z9 239 aaKnown RBP14.74□□□□□ -0.05
LDLR-202ENST00000455727 CLMPQ9H6B4 373 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 CD320Q9NPF0 282 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 USP22Q9UPT9 525 aa14.74□□□□□ -0.05
LDLR-202ENST00000455727 GFYI3L273 518 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 PDLIM1O00151 329 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 HIST1H2AGP0C0S8 130 aaPredicted RBP14.73□□□□□ -0.05
LDLR-202ENST00000455727 ATP1B2P14415 290 aaPredicted RBP14.73□□□□□ -0.05
LDLR-202ENST00000455727 GGT1P19440 569 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 HIST1H2ADP20671 130 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 PRPH2P23942 346 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 TUBA4AP68366 448 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 HTRA4P83105 476 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms