RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 RPTNQ6XPR3 784 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 PCED1BQ96HM7 432 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 MFSD1Q9H3U5 465 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 BAIAP2Q9UQB8 552 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 RPL36Q9Y3U8 105 aaKnown RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 FAM172BPA6NC97 362 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 RSL1D1O76021 490 aaKnown RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 GADD45GO95257 159 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 CFHP08603 1231 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 SPATA31D3P0C874 917 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 GAD2Q05329 585 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 NAE1Q13564 534 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 TAF1AQ15573 450 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 TMEM44Q2T9K0 475 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 IQCCQ4KMZ1 466 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 KLHL22Q53GT1 634 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 XKR5Q6UX68 686 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 SPATA31D4Q6ZUB0 917 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 CRYBG2Q8N1P7 616 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 GTPBP3Q969Y2 492 aaKnown RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 DMRTB1Q96MA1 342 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 FCRL4Q96PJ5 515 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 FERD3LQ96RJ6 166 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 MAP4K5Q9Y4K4 846 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 PER2O15055 1255 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ACOX3O15254 700 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ADH1CP00326 375 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 MNDAP41218 407 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ZBTB6Q15916 424 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 KLHL35Q6PF15 583 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 RBM23Q86U06 439 aaKnown RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ADAMTS15Q8TE58 950 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 AP2M1Q96CW1 435 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 B3GALT6Q96L58 329 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 MCMBPQ9BTE3 642 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 PAK6Q9NQU5 681 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 SNTG1Q9NSN8 517 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ZNF282Q9UDV7 671 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 A0A1W2PP18 115 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 YJEFN3A6XGL0 299 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 CA12O43570 354 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 C1RP00736 705 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 YES1P07947 543 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ATF6P18850 670 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ENTPD1P49961 510 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 MYBPC3Q14896 1274 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 C9orf64Q5T6V5 341 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 MED27Q6P2C8 311 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 AURKBQ96GD4 344 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 ACAT2Q9BWD1 397 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 POLR2J2Q9GZM3 115 aaKnown RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 TLE6Q9H808 572 aa11.84□□□□□ -0.51
SEC16A-207ENST00000453963 LIN28AQ9H9Z2 209 aaKnown RBP11.84□□□□□ -0.51
SEC16A-207ENST00000453963 CLCNKBP51801 687 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 CDH4P55283 916 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 LAPTM5Q13571 262 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 SYT16Q17RD7 645 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 CRTC2Q53ET0 693 aaPredicted RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 TPRG1LQ5T0D9 272 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 SIDT2Q8NBJ9 832 aaKnown RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 FAM98AQ8NCA5 519 aaKnown RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 LRRC20Q8TCA0 184 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 DDX1Q92499 740 aaKnown RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 UFD1Q92890 307 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 RAD51AP1Q96B01 352 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 GFM1Q96RP9 751 aaKnown RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ITPAQ9BY32 194 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 CFAP97Q9P2B7 532 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ATRNL1Q5VV63 1379 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 PRAMEF33A0A0G2JMD5 474 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 A0A1W2PQ72 361 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 H3BM21 787 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 K7EPI3 171 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 M0QX08 132 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 STX16O14662 325 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 GRM6O15303 877 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 PRAMEF10O60809 474 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ATG13O75143 517 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 RFPL1O75677 317 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 FGF3P11487 239 aaPredicted RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ITIH1P19827 911 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 AP1S1P61966 158 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 RFTN1Q14699 578 aaPredicted RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 PLEKHG4Q58EX7 1191 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ASRGL1Q7L266 308 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 CHST15Q7LFX5 561 aaPredicted RBP11.83□□□□□ -0.52
SEC16A-207ENST00000453963 SERPINA9Q86WD7 417 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ESAMQ96AP7 390 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 RDH12Q96NR8 316 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 SLC39A3Q9BRY0 314 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 ATG10Q9H0Y0 220 aa11.83□□□□□ -0.52
SEC16A-207ENST00000453963 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms