RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SLC17A6Q9P2U8 582 aa14.3□□□□□ -0.12
VPS16-205ENST00000453689 PCM1Q15154 2024 aa14.3□□□□□ -0.12
VPS16-205ENST00000453689 A0A087WUV0 522 aaPredicted RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 UBA6A0AVT1 1052 aaPredicted RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 CDRT15L2A8MXV6 281 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 HGSO14964 777 aaPredicted RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 S1PR4O95977 384 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 JMJD7P0C870 316 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 AMD1P17707 334 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 ITIH1P19827 911 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 RBMS1P29558 406 aaKnown RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 PDHA2P29803 388 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 ETV5P41161 510 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 PREPP48147 710 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 ERVPABLB-1P60509 514 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 RPA4Q13156 261 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 KBTBD12Q3ZCT8 623 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 ZNF789Q5FWF6 425 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 SNAP47Q5SQN1 464 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 CTAGE3PQ8IX95 158 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 JPH3Q8WXH2 748 aaPredicted RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 ELMO1Q92556 727 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 RSC1A1Q92681 617 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 FGF11Q92914 225 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 CYTH2Q99418 400 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 ACSS3Q9H6R3 686 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 SMYD2Q9NRG4 433 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 THSD1Q9NS62 852 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 PISDQ9UG56 409 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 GNPTGQ9UJJ9 305 aa14.29□□□□□ -0.12
VPS16-205ENST00000453689 MN1Q10571 1320 aaPredicted RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 KMT2BQ9UMN6 2715 aaPredicted RBP14.29□□□□□ -0.12
VPS16-205ENST00000453689 A8MU76 341 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 CXorf49A8MYA2 514 aaPredicted RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 H3BMM5 538 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 LIN7AO14910 233 aaPredicted RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 ESR1P03372 595 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 ITGA2BP08514 1039 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 ITGB6P18564 788 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 MLLT3P42568 568 aaPredicted RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 CD151P48509 253 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 GFERP55789 205 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 EIF3BP55884 814 aaKnown RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 ILF2Q12905 390 aaKnown RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 BOP1Q14137 746 aaKnown RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 BRD3Q15059 726 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 KLHL38Q2WGJ6 581 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 NAPRTQ6XQN6 538 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 STRA8Q7Z7C7 330 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 CLEC14AQ86T13 490 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 PLXDC1Q8IUK5 500 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 LKAAEAR1Q8TD35 194 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 TSSK1BQ9BXA7 367 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 AKAP7Q9P0M2 348 aaPredicted RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 TXNDC16Q9P2K2 825 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
VPS16-205ENST00000453689 CRYL1Q9Y2S2 319 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 HEBP2Q9Y5Z4 205 aa14.28□□□□□ -0.12
VPS16-205ENST00000453689 SLC5A10A0PJK1 596 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 IQCF5A8MTL0 148 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 IFRD1O00458 451 aaPredicted RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 ERLIN1O75477 346 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 PIAS1O75925 651 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 HAUS5O94927 633 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 C9P02748 559 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 AHSGP02765 367 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 F7P08709 466 aaPredicted RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 CCL4P13236 92 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 PKMP14618 531 aaKnown RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 GABRB3P28472 473 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 FMO4P31512 558 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 GP5P40197 560 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 EIF2S3P41091 472 aaKnown RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 CAPZBP47756 277 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 CSE1LP55060 971 aaKnown RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 PCBP4P57723 403 aaKnown RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 KRT33BQ14525 404 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 EFTUD2Q15029 972 aaKnown RBP eCLIP14.27□□□□□ -0.132e-7■■■■■ 31.4
VPS16-205ENST00000453689 PLCL1Q15111 1095 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 CTSL3PQ5NE16 218 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 CNSTQ6PJW8 725 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 ARHGAP22Q7Z5H3 698 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 PDZD3Q86UT5 571 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 PPM1NQ8N819 430 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 UHMK1Q8TAS1 419 aaKnown RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 UBLCP1Q8WVY7 318 aaPredicted RBP14.27□□□□□ -0.13
VPS16-205ENST00000453689 ZFPM2Q8WW38 1151 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 BIRC8Q96P09 236 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 DCBLD2Q96PD2 775 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 TGM7Q96PF1 710 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 CPNE1Q99829 537 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 CCDC68Q9H2F9 335 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 EPB41L4BQ9H329 900 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 KIR3DX1Q9H7L2 352 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 KLHL3Q9UH77 587 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 SLC24A2Q9UI40 661 aa14.27□□□□□ -0.13
VPS16-205ENST00000453689 PSAT1Q9Y617 370 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms