RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 KMT5CQ86Y97 462 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 RASGRP3Q8IV61 690 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 UNC5BQ8IZJ1 945 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 LCN9Q8WX39 176 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 PWWP2AQ96N64 755 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 TEFMQ96QE5 360 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 EBNA1BP2Q99848 306 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 CTRCQ99895 268 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 CPNE5Q9HCH3 593 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
SCAMP4-205ENST00000452128 F8W8V4 182 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 BANF1O75531 89 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 SEC31AO94979 1220 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 ESR1P03372 595 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 POLR2CP19387 275 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 PRDX3P30048 256 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 FMO4P31512 558 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 SEPHS1P49903 392 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 UCNP55089 124 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 TIAL1Q01085 375 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 DHX9Q08211 1270 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 HSPA14Q0VDF9 509 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 PLCL1Q15111 1095 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 RNF187Q5TA31 235 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 CASC4Q6P4E1 433 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 ZNF449Q6P9G9 518 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 PCSK4Q6UW60 755 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 UNC5AQ6ZN44 842 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 ZNF572Q7Z3I7 529 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 AMIGO1Q86WK6 493 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 OOSP2Q86WS3 158 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 DENND6AQ8IWF6 608 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 SPATA4Q8NEY3 305 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 ZNF669Q96BR6 464 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 STAMBPL1Q96FJ0 436 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 CCNL2Q96S94 520 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 TRIM51Q9BSJ1 452 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 SRMSQ9H3Y6 488 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 XKR8Q9H6D3 395 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 INTS10Q9NVR2 710 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 SAMD15Q9P1V8 674 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 GNPTGQ9UJJ9 305 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 ASF1AQ9Y294 204 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 BTRCQ9Y297 605 aa15.63■□□□□ 0.09
SCAMP4-205ENST00000452128 STMND1H3BQB6 276 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 POLR1CO15160 346 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 F7P08709 466 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 ZNF28P17035 718 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 PAMP19021 973 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 GABRB3P28472 473 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 PAFAH1B1P43034 410 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 CLCN7P51798 805 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 VAC14Q08AM6 782 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 CTBP1Q13363 440 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 KRT33BQ14525 404 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 KYNUQ16719 465 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 LONRF1Q17RB8 773 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 DNTTIP2Q5QJE6 756 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 PLEKHS1Q5SXH7 462 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 PTRHD1Q6GMV3 140 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 FBXO38Q6PIJ6 1188 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 CEACAM20Q6UY09 585 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 SYT10Q6XYQ8 523 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 SPNS2Q8IVW8 549 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 BBC3Q96PG8 261 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 OR2A14Q96R47 310 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 HGH1Q9BTY7 390 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 C1GALT1Q9NS00 363 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 SPHK1Q9NYA1 384 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 OR6C2Q9NZP2 312 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 KLHL42Q9P2K6 505 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 POLG2Q9UHN1 485 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 CRYL1Q9Y2S2 319 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 TEX264Q9Y6I9 313 aa15.62■□□□□ 0.09
SCAMP4-205ENST00000452128 E7ESA3 106 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 H3BMM5 538 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 SMAPO00193 183 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 MATN2O00339 956 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 TERTO14746 1132 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 PRICKLE3O43900 615 aaPredicted RBP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 NIPSNAP2O75323 286 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 RASSF9O75901 435 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 TIAF1O95411 115 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 MATN4O95460 622 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 APOA4P06727 396 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 MSL3P1P0C860 447 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 PKMP14618 531 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 PGAM1P18669 254 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 ATP5DP30049 168 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 PEBP1P30086 187 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 CSE1LP55060 971 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 EIF3BP55884 814 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 TMPRSS3P57727 454 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 ABRQ12979 859 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 MAP7Q14244 749 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 KCNAB1Q14722 419 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 CRYMQ14894 314 aa15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.61■□□□□ 0.09
SCAMP4-205ENST00000452128 KIAA1614Q5VZ46 1190 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms