RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RASSF9O75901 435 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 CRTAMO95727 393 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 MT-ND3P03897 115 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 CCNYL3P0C7X3 344 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 PRSS56P0CW18 603 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 FGF5P12034 268 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 SSTR1P30872 391 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 DLSTP36957 453 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 SEPHS1P49903 392 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 FOXK1P85037 733 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 TMEM115Q12893 351 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 GTF2H3Q13889 308 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 UBAP2LQ14157 1087 aaKnown RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 ANKRD20A4Q4UJ75 823 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 LACTB2Q53H82 288 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 CACHD1Q5VU97 1274 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 PRSS42Q7Z5A4 293 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 BPHLQ86WA6 291 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 RASGRP3Q8IV61 690 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 KLHL6Q8WZ60 621 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 CXorf40BQ96DE9 158 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 TTC25Q96NG3 672 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 FCRL4Q96PJ5 515 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 OR6C1Q96RD1 312 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 FAM129AQ9BZQ8 928 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 CDC42EP4Q9H3Q1 356 aaKnown RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 TREX1Q9NSU2 369 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 NINJ2Q9NZG7 142 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 ZC3H7BQ9UGR2 993 aaKnown RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 PADI1Q9ULC6 663 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 DNAJC16Q9Y2G8 782 aa13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 DNMT3AQ9Y6K1 912 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 UBR5O95071 2799 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-213ENST00000448520 COL12A1Q99715 3063 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 ZCWPW2A0A1B0GU75 182 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 FAM237BA0A1B0GVD1 139 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 CCDC162PA2VCL2 907 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 C2orf81A6NN90 581 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 CYSRT1A8MQ03 144 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 GOLGA8KD6RF30 607 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 GOLGA8TH3BQL2 631 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 AP3B1O00203 1094 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 GAPDHSO14556 408 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 EIF3HO15372 352 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 PIAS1O75925 651 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 BRAFP15056 766 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 PGAM1P18669 254 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 ARNTP27540 789 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 RPL10P27635 214 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 HMGCLP35914 325 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 HALP42357 657 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 GPX6P59796 221 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 SRSF1Q07955 248 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 CRYMQ14894 314 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 KYNUQ16719 465 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 TRMT10BQ6PF06 316 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 KLHL35Q6PF15 583 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 FAM151BQ6UXP7 276 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 PPP1R3BQ86XI6 285 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF547Q8IVP9 402 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 UHMK1Q8TAS1 419 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 AENQ8WTP8 325 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 PYROXD1Q8WU10 500 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 STYXQ8WUJ0 223 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 HDAC10Q969S8 669 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 TXLNGYQ9BZA5 131 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 FAM96AQ9H5X1 160 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 MRM3Q9HC36 420 aaKnown RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 NLE1Q9NVX2 485 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 SEMA5BQ9P283 1151 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 SLC17A6Q9P2U8 582 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 CROTQ9UKG9 612 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 POLHQ9Y253 713 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 PKP3Q9Y446 797 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 KCNMB2Q9Y691 235 aa13.42□□□□□ -0.26
PDLIM2-213ENST00000448520 MKRN2OSH3BPM6 223 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 MTX2O75431 263 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 SPAG6O75602 509 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 ZNF28P17035 718 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 NELFEP18615 380 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 F8A1P23610 371 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 CAPZBP47756 277 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 LEPRP48357 1165 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 CDKN1CP49918 316 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 SH3BP2P78314 561 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 XIAPP98170 497 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 ACVR1Q04771 509 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 KLRB1Q12918 225 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 CBLBQ13191 982 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 CHRNA6Q15825 494 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 SEPT7Q16181 437 aaKnown RBP13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 PLA2G4EQ3MJ16 856 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 STEAP4Q687X5 459 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 TCTN3Q6NUS6 607 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 TMEM135Q86UB9 458 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 AMZ2Q86W34 360 aa13.41□□□□□ -0.26
PDLIM2-213ENST00000448520 EIF1ADQ8N9N8 165 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms