RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OR6C75A6NL08 312 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ZNF99A8MXY4 864 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-204ENST00000447182 FAM220BPB1ANY3 271 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 TAPBPO15533 448 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 NDUFS2O75306 463 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CREG1O75629 220 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 WDR47O94967 919 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 EOMESO95936 686 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ITGAMP11215 1152 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 RAD23AP54725 363 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 PIGFQ07326 219 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ACOX1Q15067 660 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CLLU1OSQ5K130 101 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ANKRD34AQ69YU3 496 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 TRIM46Q7Z4K8 759 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 TMEM179BQ7Z7N9 219 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CALHM3Q86XJ0 350 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 HIPK1Q86Z02 1210 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 DCP2Q8IU60 420 aaKnown RBP18.71■□□□□ 0.59
SDCBP-204ENST00000447182 TMCO5AQ8N6Q1 288 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 EFHBQ8N7U6 833 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 WDR12Q9GZL7 423 aaKnown RBP18.71■□□□□ 0.59
SDCBP-204ENST00000447182 AKIP1Q9NQ31 210 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 INVSQ9Y283 1065 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CPQQ9Y646 472 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 HS6ST1O60243 411 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CLDN11O75508 207 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 INMTO95050 263 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 GABARAPO95166 117 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CYP2A13Q16696 494 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 FAM26DQ5JW98 314 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 SPANXN4Q5MJ08 99 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 CACHD1Q5VU97 1274 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ARL10Q8N8L6 244 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ZMYM5Q9UJ78 669 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 SLC27A5Q9Y2P5 690 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 PRG3Q9Y2Y8 225 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-204ENST00000447182 OARD1Q9Y530 152 aa18.71■□□□□ 0.59
SDCBP-204ENST00000447182 ACVR2AP27037 513 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 GNPDA1P46926 289 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 HSPA7P48741 367 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 CDK5R2Q13319 367 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 TRIM16LQ309B1 348 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 CERS6Q6ZMG9 384 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 HOMEZQ8IX15 550 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 LIX1Q8N485 282 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 TBCDQ9BTW9 1192 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 INIPQ9NRY2 104 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 TRNAU1APQ9NX07 287 aaKnown RBP18.7■□□□□ 0.58
SDCBP-204ENST00000447182 ELOVL2Q9NXB9 296 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 GIN1Q9NXP7 522 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 IL17CQ9P0M4 197 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 DGKBQ9Y6T7 804 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 FRMPD3Q5JV73 1810 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 ADAM23O75077 832 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 XYLBO75191 536 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 RECQL5O94762 991 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-204ENST00000447182 SLC11A2P49281 568 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 GZMMP51124 257 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 RPS24P62847 133 aaKnown RBP18.7■□□□□ 0.58
SDCBP-204ENST00000447182 NKX3-2P78367 333 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 CHPFQ8IZ52 775 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 FAR1Q8WVX9 515 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 S100ZQ8WXG8 99 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 TBC1D20Q96BZ9 403 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 ALPK1Q96QP1 1244 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 ARMC7Q9H6L4 198 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 SPC25Q9HBM1 224 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 FNDC3AQ9Y2H6 1198 aaKnown RBP18.7■□□□□ 0.58
SDCBP-204ENST00000447182 ORC6Q9Y5N6 252 aa18.7■□□□□ 0.58
SDCBP-204ENST00000447182 MTMR11A4FU01 709 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 BCKDKO14874 412 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 SLC22A1O15245 554 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 ERN1O75460 977 aaKnown RBP18.69■□□□□ 0.58
SDCBP-204ENST00000447182 E2F6O75461 281 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 PRKACGP22612 351 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 RPS3P23396 243 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■■□□ 16.9
SDCBP-204ENST00000447182 EMX1Q04741 257 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-204ENST00000447182 LRIF1Q5T3J3 769 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 METTL2BQ6P1Q9 378 aaKnown RBP18.69■□□□□ 0.58
SDCBP-204ENST00000447182 MINDY2Q8NBR6 621 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 CDK5RAP1Q96SZ6 601 aaKnown RBP18.69■□□□□ 0.58
SDCBP-204ENST00000447182 NTMT1Q9BV86 223 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 FAM126AQ9BYI3 521 aaPredicted RBP18.69■□□□□ 0.58
SDCBP-204ENST00000447182 CRISPLD1Q9H336 500 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 NECTIN3Q9NQS3 549 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 TRPS1Q9UHF7 1281 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 DNMT3LQ9UJW3 386 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 NOD1Q9Y239 953 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 PKP3Q9Y446 797 aa18.69■□□□□ 0.58
SDCBP-204ENST00000447182 PTGES3LE9PB15 166 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 ULK1O75385 1050 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 ALDH2P05091 517 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 RHOCP08134 193 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 CYBAP13498 195 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 MAGEA2P43356 314 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 RGS4P49798 205 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 LDLRAP1Q5SW96 308 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms