RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 C6P13671 934 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 DPP6P42658 865 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 SLC6A12P48065 614 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 TRAP1Q12931 704 aaKnown RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 GTF2H3Q13889 308 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 CEACAM7Q14002 265 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 RCAN2Q14206 197 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 TAF11Q15544 211 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 DCBLD1Q8N8Z6 715 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 RASGEF1AQ8N9B8 481 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 FBXL8Q96CD0 374 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 SPDL1Q96EA4 605 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 A0A1W2PP18 115 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 FAM234BA2RU67 622 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 LSM1O15116 133 aaKnown RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 PSIP1O75475 530 aaKnown RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 RECQL5O94762 991 aaPredicted RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 BAG2O95816 211 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 NPPAP01160 153 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 EPHX1P07099 455 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 IL12RB1P42701 662 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 GDF5P43026 501 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 GPR1P46091 355 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 DIO3P55073 304 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 PLOD1Q02809 727 aaPredicted RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 ITPRIPL2Q3MIP1 535 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 SCIMPQ6UWF3 145 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 TRIM46Q7Z4K8 759 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 DHDDSQ86SQ9 333 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 VRK3Q8IV63 474 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 SFRP1Q8N474 314 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 MINDY1Q8N5J2 469 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 EFCAB3Q8N7B9 438 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 SNX31Q8N9S9 440 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 DNAJC9Q8WXX5 260 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 RIPOR3Q96MK2 946 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 ACTR8Q9H981 624 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 TMEM181Q9P2C4 612 aa15.33■□□□□ 0.04
SNX13-204ENST00000444712 LEF1Q9UJU2 399 aaPredicted RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 EIF3LQ9Y262 564 aaKnown RBP15.33■□□□□ 0.04
SNX13-204ENST00000444712 SLC5A10A0PJK1 596 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 LIN7AO14910 233 aaPredicted RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 TSPAN6O43657 245 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 RNASEH1O60930 286 aaKnown RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 SORBS2O94875 1100 aaKnown RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 XRCC1P18887 633 aaPredicted RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 HTR6P50406 440 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 PRKG2Q13237 762 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 TRIM25Q14258 630 aaKnown RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 GRM2Q14416 872 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 ABRAXAS2Q15018 415 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 IMPG1Q17R60 797 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 AP5B1Q2VPB7 878 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 RAET1GQ6H3X3 334 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 MBOAT1Q6ZNC8 495 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 MMAAQ8IVH4 418 aaKnown RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 PYDC1Q8WXC3 89 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 USP7Q93009 1102 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 PRSS16Q9NQE7 514 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 DNAJC11Q9NVH1 559 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 NMRK1Q9NWW6 199 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 KLQ9UEF7 1012 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 MBD1Q9UIS9 605 aaPredicted RBP15.32■□□□□ 0.04
SNX13-204ENST00000444712 SNX6Q9UNH7 406 aa15.32■□□□□ 0.04
SNX13-204ENST00000444712 CKAP5Q14008 2032 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 CCDC154A6NI56 674 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 LOC730098B7Z3J9 87 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 E7ENX8 843 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 INPP4BO15327 924 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 LINC01565O15544 149 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 VEGFDO43915 354 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 UGDHO60701 494 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 EEDO75530 441 aaKnown RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 ACADSP16219 412 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 CAPN3P20807 821 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 POLR2JP52435 117 aaKnown RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 NME5P56597 212 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 ZNF33BQ06732 778 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 FAM219BQ5XKK7 198 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 TMEM220Q6QAJ8 160 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 PRR23BQ6ZRT6 265 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 SLC22A15Q8IZD6 547 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 FAM9CQ8IZT9 166 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 BEND7Q8N7W2 519 aaPredicted RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 CCDC138Q96M89 665 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 MYADMQ96S97 322 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 C1orf50Q9BV19 199 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 ASIC5Q9NY37 505 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 ZNF490Q9ULM2 529 aaPredicted RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 MANBAO00462 879 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 LAMP2P13473 410 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 GDI1P31150 447 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 CTSCP53634 463 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 PTCHD3Q3KNS1 767 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 VPS26BQ4G0F5 336 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 MTSS1LQ765P7 747 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 KLHDC8AQ8IYD2 350 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 NAF1Q96HR8 494 aaKnown RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 P2RY13Q9BPV8 354 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 KXD1Q9BQD3 176 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms