RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ENO3P13929 434 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 GFAPP14136 432 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 CCR7P32248 378 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 CBSP35520 551 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 RPS21P63220 83 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 NFKB2Q00653 900 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 ACSBG2Q5FVE4 666 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 ZNF648Q5T619 568 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 TMEM214Q6NUQ4 689 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 KIAA1324Q6UXG2 1013 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 GPSM1Q86YR5 675 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 ST13P4Q8IZP2 240 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 PELI3Q8N2H9 469 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 PIWIL2Q8TC59 973 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 FUBP1Q96AE4 644 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 FAM131CQ96AQ9 280 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 MRGPRX1Q96LB2 322 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 B3GNT4Q9C0J1 378 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 RBM38Q9H0Z9 239 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 MARCOQ9UEW3 520 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 MBD1Q9UIS9 605 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 TSR3Q9UJK0 312 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 CNOT6Q9ULM6 557 aaKnown RBP7.93□□□□□ -1.14
CCDC39-201ENST00000442201 FZD4Q9ULV1 537 aa7.93□□□□□ -1.14
CCDC39-201ENST00000442201 EYSQ5T1H1 3165 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 A0A0G2JND7 137 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 PRR23AA6NEV1 266 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 OR2AG2A6NM03 316 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 UBXN8O00124 270 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 PLRG1O43660 514 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 NPHS1O60500 1241 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 KITP10721 976 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 MTHFD2P13995 350 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 IMPDH1P20839 514 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 AOAHP28039 575 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SERPINB5P36952 375 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 RXRGP48443 463 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 PRKCQQ04759 706 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 HSPA14Q0VDF9 509 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SGCGQ13326 291 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 AGERQ15109 404 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SEL1L3Q68CR1 1132 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SIGIRRQ6IA17 410 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 KIAA1161Q6NSJ0 714 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 TMEM92Q6UXU6 159 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 LRRC74BQ6ZQY2 392 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 USP30Q70CQ3 517 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 FBXO39Q8N4B4 442 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 PTGR2Q8N8N7 351 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 RASGEF1AQ8N9B8 481 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 GOLM1Q8NBJ4 401 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SORT1Q99523 831 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 NEURL2Q9BR09 285 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ILKAPQ9H0C8 392 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 CRNNQ9UBG3 495 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 IKZF3Q9UKT9 509 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 TDRKHQ9Y2W6 561 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 COL4A2P08572 1712 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SGTAO43765 313 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ATG13O75143 517 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ARRB2P32121 409 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 TMED10P49755 219 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ADPRHP54922 357 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 RPS3AP61247 264 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 GTF2H3Q13889 308 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 BOP1Q14137 746 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 PFKFB4Q16877 469 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 WSCD2Q2TBF2 565 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ARL13AQ5H913 290 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 PLEKHS1Q5SXH7 462 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 FRA10AC1Q70Z53 315 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ADHFE1Q8IWW8 467 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 VPS37AQ8NEZ2 397 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 RFWD2Q8NHY2 731 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 C10orf82Q8WW14 230 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ASZ1Q8WWH4 475 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ELMO1Q92556 727 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 MED30Q96HR3 178 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 CNDP1Q96KN2 507 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 FAM126AQ9BYI3 521 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 NDEL1Q9GZM8 345 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 EPHX3Q9H6B9 360 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 TRIM39Q9HCM9 518 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ACSS2Q9NR19 701 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 CA14Q9ULX7 337 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 SORCS3Q9UPU3 1222 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 MRPS17Q9Y2R5 130 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 RAP2CQ9Y3L5 183 aa7.92□□□□□ -1.14
CCDC39-201ENST00000442201 ZNF106Q9H2Y7 1883 aaKnown RBP7.92□□□□□ -1.14
CCDC39-201ENST00000442201 TBC1D3DA0A087WVF3 549 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 TBC1D3IA0A087WXS9 549 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 TBC1D3EA0A087X179 549 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 TBC1D3KA0A087X1G2 549 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 A0A1W2PQU0 124 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 TCRBV21S2A2A0A5A6 115 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 TBC1D3FA6NER0 549 aaPredicted RBP7.91□□□□□ -1.14
CCDC39-201ENST00000442201 FAM25EA8MYX2 175 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 TBC1D3LB9A6J9 549 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 SNX2O60749 519 aa7.91□□□□□ -1.14
CCDC39-201ENST00000442201 SUPT7LO94864 414 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms