RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CES3Q6UWW8 571 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARHGAP12Q8IWW6 846 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHCHD4Q8N4Q1 142 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 GFM1Q96RP9 751 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CAB39LQ9H9S4 337 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CD93Q9NPY3 652 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PRMT8Q9NR22 394 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 NDE1Q9NXR1 346 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 MBD1Q9UIS9 605 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 MYOFQ9NZM1 2061 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SCN8AQ9UQD0 1980 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRIM64BA6NI03 449 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 AQP9O43315 295 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SNUPNO95149 360 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 MPOP05164 745 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 C8BP07358 591 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CPA3P15088 417 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 HK2P52789 917 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 BNIP3Q12983 259 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 LSM12Q3MHD2 195 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SH2D4BQ5SQS7 431 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 POTEHQ6S545 545 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CEP97Q8IW35 865 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 MFSD3Q96ES6 412 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM129BQ96TA1 746 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 TSC22D3Q99576 134 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 COPS8Q99627 209 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 KLHL4Q9C0H6 718 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 IQCGQ9H095 443 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 LRRC40Q9H9A6 602 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZBTB26Q9HCK0 441 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SERGEFQ9UGK8 458 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 SCOCQ9UIL1 159 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 PRKAB1Q9Y478 270 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 VWA8A3KMH1 1905 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 CNTRLQ7Z7A1 2325 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 ACACBO00763 2458 aa7.25□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR2AG2A6NM03 316 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZMPSTE24O75844 475 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 FGF1P05230 155 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 C2P06681 752 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 ADSLP30566 484 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 MXRA7P84157 204 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 E2F1Q01094 437 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 NFATC2Q13469 925 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CYTH1Q15438 398 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 C1orf146Q5VVC0 180 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PIM3Q86V86 326 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 SPNS2Q8IVW8 549 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 SDR16C5Q8N3Y7 309 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 EFCAB3Q8N7B9 438 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 RDH11Q8TC12 318 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CDKL2Q92772 493 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 APOOQ9BUR5 198 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM245Q9H330 911 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 NDOR1Q9UHB4 597 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 STOML2Q9UJZ1 356 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PRPF19Q9UMS4 504 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PSMD13Q9UNM6 376 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 FADS3Q9Y5Q0 445 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 GLYATL1P3A0A0U1RQE8 302 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 GSAPA4D1B5 854 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 FBP2O00757 339 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 BCAS2O75934 225 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 HLA-DQB2P05538 268 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF30P17039 623 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 XRCC1P18887 633 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 MPSTP25325 297 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PIK3R1P27986 724 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 GSTT1P30711 240 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 HOXA6P31267 233 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 SERPINB8P50452 374 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 LRP8Q14114 963 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PTPRNQ16849 979 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 AARS2Q5JTZ9 985 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 C6orf10Q5SRN2 563 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CERCAMQ5T4B2 595 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 C1QTNF12Q5T7M4 302 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM219BQ5XKK7 198 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 BORAQ6PGQ7 559 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 LCA5Q86VQ0 697 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 RASSF3Q86WH2 238 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 NAXDQ8IW45 347 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 CHERPQ8IWX8 916 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF683Q8IZ20 524 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 DEFB107AQ8IZN7 70 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 AADATQ8N5Z0 425 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR56A4Q8NGH8 313 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 FAM174AQ8TBP5 190 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 VPS39Q96JC1 886 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM74BQ9NUR3 256 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 NCKIPSDQ9NZQ3 722 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 PADI4Q9UM07 663 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 RNF11Q9Y3C5 154 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 ANKRD66B4E2M5 251 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 MTX2O75431 263 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 OR6B1O95007 311 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 AHSGP02765 367 aa7.24□□□□□ -1.25
CDC42BPA-208ENST00000442054 TIMP2P16035 220 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms