RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 WHAMMP3Q1A5X7 153 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 CILP2Q8IUL8 1156 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 ZNF843Q8N446 348 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
SMPD4-210ENST00000441135 ELMO1Q92556 727 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 LPGAT1Q92604 370 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 MED8Q96G25 268 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 CTRCQ99895 268 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 ERP44Q9BS26 406 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 MVB12BQ9H7P6 319 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 WHRNQ9P202 907 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 PILRAQ9UKJ1 303 aa17.74■□□□□ 0.43
SMPD4-210ENST00000441135 KPNA5O15131 536 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 ESR1P03372 595 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 WT1P19544 449 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 MAP4P27816 1152 aaKnown RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 ITGA8P53708 1063 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 ARL4CP56559 192 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 DHX9Q08211 1270 aaKnown RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 CRYMQ14894 314 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 PLCL1Q15111 1095 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 HIF1AQ16665 826 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 SPANXN3Q5MJ09 141 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 IRGCQ6NXR0 463 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 CYB5D1Q6P9G0 228 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 LDB1Q86U70 411 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 NLGN4XQ8N0W4 816 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 OTUD6BQ8N6M0 293 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 SPDYE1Q8NFV5 336 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 NLGN4YQ8NFZ3 816 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 GABPB2Q8TAK5 448 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 ASZ1Q8WWH4 475 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 KIAA1143Q96AT1 154 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 FAM167BQ9BTA0 163 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 SPRY4Q9C004 299 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 TRIT1Q9H3H1 467 aaKnown RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 TMEM184BQ9Y519 407 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-210ENST00000441135 SDK2Q58EX2 2172 aa17.73■□□□□ 0.43
SMPD4-210ENST00000441135 E7ESA3 106 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 RAD51CO43502 376 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 GPC4O75487 556 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 STK17BO94768 372 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 APOA4P06727 396 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 ACADLP28330 430 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 PDHA2P29803 388 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 RPL21P46778 160 aaKnown RBP17.72■□□□□ 0.43
SMPD4-210ENST00000441135 FOXM1Q08050 763 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 C2orf54Q08AI8 447 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 THOC5Q13769 683 aaKnown RBP17.72■□□□□ 0.43
SMPD4-210ENST00000441135 LY6DQ14210 128 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 FRG1Q14331 258 aaKnown RBP17.72■□□□□ 0.43
SMPD4-210ENST00000441135 IL11RAQ14626 422 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 TMED2Q15363 201 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 SYTL3Q4VX76 610 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 CACHD1Q5VU97 1274 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 PTRHD1Q6GMV3 140 aaKnown RBP17.72■□□□□ 0.43
SMPD4-210ENST00000441135 CENPUQ71F23 418 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 ACVR1CQ8NER5 493 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 UBXN4Q92575 508 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 BIRC8Q96P09 236 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 TRIM56Q9BRZ2 755 aaKnown RBP17.72■□□□□ 0.43
SMPD4-210ENST00000441135 APMAPQ9HDC9 416 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 FAM8A1Q9UBU6 413 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 SLC24A2Q9UI40 661 aa17.72■□□□□ 0.43
SMPD4-210ENST00000441135 SLCO2B1O94956 709 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 LIFP15018 202 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 AOAHP28039 575 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 CCR7P32248 378 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 PREPP48147 710 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 SEPHS1P49903 392 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 CALCOCO2Q13137 446 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 BOP1Q14137 746 aaKnown RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 MAP7Q14244 749 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 BBS9Q3SYG4 887 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 MSS51Q4VC12 460 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 STEAP4Q687X5 459 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 DUPD1Q68J44 220 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 ZNF470Q6ECI4 717 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 FAM92BQ6ZTR7 304 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 SLC22A15Q8IZD6 547 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 CARFQ8N187 725 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 KLHL6Q8WZ60 621 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 TFGQ92734 400 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 CD180Q99467 661 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 ARHGAP9Q9BRR9 750 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 EFHD1Q9BUP0 239 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 PHACTR1Q9C0D0 580 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 RAB17Q9H0T7 212 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 TFB2MQ9H5Q4 396 aaKnown RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 GPN2Q9H9Y4 310 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 LATS2Q9NRM7 1088 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 C20orf96Q9NUD7 363 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 SEMA5BQ9P283 1151 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 KLHL42Q9P2K6 505 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 CDYLQ9Y232 598 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 UTP11Q9Y3A2 253 aaKnown RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 CFAP20Q9Y6A4 193 aaKnown RBP17.71■□□□□ 0.43
SMPD4-210ENST00000441135 TEX264Q9Y6I9 313 aa17.71■□□□□ 0.43
SMPD4-210ENST00000441135 UBA6A0AVT1 1052 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-210ENST00000441135 BHMG1C9JSJ3 638 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms