RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 STPG4Q8N801 248 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 ZBTB8BQ8NAP8 495 aaPredicted RBP4.54□□□□□ -1.68
PFDN4-202ENST00000441080 SLC47A1Q96FL8 570 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 SFXN2Q96NB2 322 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 SEPHS2Q99611 448 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 GPR88Q9GZN0 384 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 RABEP2Q9H5N1 569 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 NOL11Q9H8H0 719 aaKnown RBP4.54□□□□□ -1.68
PFDN4-202ENST00000441080 CNOT10Q9H9A5 744 aaKnown RBP4.54□□□□□ -1.68
PFDN4-202ENST00000441080 PIH1D3Q9NQM4 214 aaKnown RBP4.54□□□□□ -1.68
PFDN4-202ENST00000441080 ECHDC1Q9NTX5 307 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 COQ3Q9NZJ6 369 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 NFKBIL1Q9UBC1 381 aaPredicted RBP4.54□□□□□ -1.68
PFDN4-202ENST00000441080 SLC24A2Q9UI40 661 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 TUBE1Q9UJT0 475 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 OSGIN1Q9UJX0 560 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 ACAD8Q9UKU7 415 aa4.54□□□□□ -1.68
PFDN4-202ENST00000441080 TMEM221A6NGB7 291 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 DUXAA6NLW8 204 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 E9PI62 339 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 GAPDHSO14556 408 aaPredicted RBP4.53□□□□□ -1.68
PFDN4-202ENST00000441080 CIDEAO60543 219 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 DANCRP0C864 163 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 SLC6A6P31641 620 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 MC5RP33032 325 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 PDX1P52945 283 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 PPP5CP53041 499 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 LINC01547P58512 204 aaPredicted RBP4.53□□□□□ -1.68
PFDN4-202ENST00000441080 RALGDSQ12967 914 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 ZC2HC1CQ53FD0 456 aaPredicted RBP4.53□□□□□ -1.68
PFDN4-202ENST00000441080 SFMBT2Q5VUG0 894 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 SLC35E4Q6ICL7 350 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 KRT80Q6KB66 452 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 MEX3BQ6ZN04 569 aaKnown RBP4.53□□□□□ -1.68
PFDN4-202ENST00000441080 ARHGAP24Q8N264 748 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 TTC30BQ8N4P2 665 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 DNAJC22Q8N4W6 341 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 TRIML1Q8N9V2 468 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 TDRD5Q8NAT2 981 aaKnown RBP4.53□□□□□ -1.68
PFDN4-202ENST00000441080 DNASE2BQ8WZ79 361 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 RTP3Q9BQQ7 232 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 RHNO1Q9BSD3 238 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 PRMT7Q9NVM4 692 aaPredicted RBP4.53□□□□□ -1.68
PFDN4-202ENST00000441080 WDR35Q9P2L0 1181 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 NRBP1Q9UHY1 535 aa4.53□□□□□ -1.68
PFDN4-202ENST00000441080 FLT1P17948 1338 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 SOS1Q07889 1333 aaPredicted RBP4.52□□□□□ -1.69
PFDN4-202ENST00000441080 FAM72CH0Y354 149 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 CLIC2O15247 247 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 GGPS1O95749 300 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 TSHBP01222 138 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 INHBAP08476 426 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 IGHV4-38-2P0DP08 117 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 ANOS1P23352 680 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 EEF1DP29692 281 aaKnown RBP4.52□□□□□ -1.69
PFDN4-202ENST00000441080 PCGF2P35227 344 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 HNRNPKP61978 463 aaKnown RBP eCLIP4.52□□□□□ -1.69
PFDN4-202ENST00000441080 DMPKQ09013 629 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 KLHL26Q53HC5 615 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF628Q5EBL2 1059 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 ARMC4Q5T2S8 1044 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 FAM72AQ5TYM5 149 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 FAM72DQ6L9T8 149 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 CEACAM20Q6UY09 585 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 CENPVQ7Z7K6 275 aaPredicted RBP4.52□□□□□ -1.69
PFDN4-202ENST00000441080 ZNF554Q86TJ5 538 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 FAM72BQ86X60 149 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 OR6J1Q8NGC5 347 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 OR10V1Q8NGI7 309 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 OR1J1Q8NGS3 322 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 ATL1Q8WXF7 558 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 CNDP2Q96KP4 475 aaKnown RBP4.52□□□□□ -1.69
PFDN4-202ENST00000441080 LINC00615Q96LM1 132 aaPredicted RBP4.52□□□□□ -1.69
PFDN4-202ENST00000441080 ARRDC1-AS1Q9H2J1 176 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 PADI2Q9Y2J8 665 aa4.52□□□□□ -1.69
PFDN4-202ENST00000441080 A0A1W2PPM1 405 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 SPRY1O43609 319 aaPredicted RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 DIAPH2O60879 1101 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 WDPCPO95876 746 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 LIFP15018 202 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 TIMP3P35625 211 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 RAB28P51157 221 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 LGALS3BPQ08380 585 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 TCP11X2Q5H9J9 407 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 KRT39Q6A163 491 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 FAM198BQ6UWH4 519 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 RBMS3Q6XE24 437 aaKnown RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 RBPMS2Q6ZRY4 209 aaKnown RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 USP43Q70EL4 1123 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 TRPT1Q86TN4 253 aaKnown RBP4.51□□□□□ -1.69
PFDN4-202ENST00000441080 ISCA2Q86U28 154 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 CNBD1Q8NA66 436 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 XXYLT1Q8NBI6 393 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 OR13J1Q8NGT2 312 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 FGFBP3Q8TAT2 258 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 CCDC107Q8WV48 283 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 FCAMRQ8WWV6 532 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 HDAC11Q96DB2 347 aa4.51□□□□□ -1.69
PFDN4-202ENST00000441080 RMDN1Q96DB5 314 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms