RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 BRINP1O60477 761 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 VPS26AO75436 327 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 ITGA2BP08514 1039 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 JMJD7P0C870 316 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 CD9P21926 228 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 MPSTP25325 297 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 GABRB3P28472 473 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 RBMS1P29558 406 aaKnown RBP11.49□□□□□ -0.57
HSPG2-206ENST00000439717 SHMT2P34897 504 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 CLCN7P51798 805 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 GFERP55789 205 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 ERVPABLB-1P60509 514 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 ABRQ12979 859 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 C16orf72Q14CZ0 275 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 UGT3A1Q6NUS8 523 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 ARMC6Q6NXE6 501 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 NEK10Q6ZWH5 1172 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 PRSS42Q7Z5A4 293 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 AMIGO1Q86WK6 493 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 CARFQ8N187 725 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 RCBTB1Q8NDN9 531 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 OR4E2Q8NGC2 313 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 OR5AR1Q8NGP9 310 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 JPH3Q8WXH2 748 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-206ENST00000439717 INPP5DQ92835 1189 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 FOPNLQ96NB1 174 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 TGM7Q96PF1 710 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 CD180Q99467 661 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 HGH1Q9BTY7 390 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 B3GNT4Q9C0J1 378 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 SRMSQ9H3Y6 488 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 THSD1Q9NS62 852 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 ZDHHC18Q9NUE0 388 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 ZFATQ9P243 1243 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 MTRF1LQ9UGC7 380 aaKnown RBP11.49□□□□□ -0.57
HSPG2-206ENST00000439717 MED16Q9Y2X0 877 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 DHRS7Q9Y394 339 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
HSPG2-206ENST00000439717 KNTC1P50748 2209 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 UNC13CQ8NB66 2214 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 OR6C74A6NCV1 312 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 A8MU76 341 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 B4E171 279 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 EIF3FO00303 357 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-206ENST00000439717 SPAG6O75602 509 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 TNFSF15O95150 251 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 MATN4O95460 622 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 CBSLP0DN79 551 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 ENO3P13929 434 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-206ENST00000439717 CBSP35520 551 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 CCNFP41002 786 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 TSPAN7P41732 249 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 SKIV2L2P42285 1042 aaKnown RBP11.48□□□□□ -0.57
HSPG2-206ENST00000439717 MAGEA4P43358 317 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 PRKAA1Q13131 559 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 PRKG2Q13237 762 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 TBC1D25Q3MII6 688 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 SNAP47Q5SQN1 464 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 IRGCQ6NXR0 463 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 TTC23LQ6PF05 361 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 C3orf62Q6ZUJ4 267 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 CCDC25Q86WR0 208 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 DCUN1D3Q8IWE4 304 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 MAGEC3Q8TD91 643 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 SKA2Q8WVK7 121 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-206ENST00000439717 UBXN4Q92575 508 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 CDKL2Q92772 493 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 FAM136AQ96C01 138 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 ZNF768Q9H5H4 540 aaKnown RBP11.48□□□□□ -0.57
HSPG2-206ENST00000439717 ASCL3Q9NQ33 180 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 TAS2R13Q9NYV9 303 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 SEMA5BQ9P283 1151 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 GALPQ9UBC7 116 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 PISDQ9UG56 409 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 KLHL3Q9UH77 587 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 DMGDHQ9UI17 866 aaKnown RBP11.48□□□□□ -0.57
HSPG2-206ENST00000439717 PCDHGA7Q9Y5G6 932 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 ASPMQ8IZT6 3477 aa11.48□□□□□ -0.57
HSPG2-206ENST00000439717 TLCD2A6NGC4 264 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 CDRT15L2A8MXV6 281 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 ZNF500O60304 480 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 RASSF9O75901 435 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 C1orf105O95561 183 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 F7P08709 466 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 HGFP14210 728 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 POLR2CP19387 275 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 SSTR1P30872 391 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 CUL1Q13616 776 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 KYNUQ16719 465 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 ACSBG2Q5FVE4 666 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 DNTTIP2Q5QJE6 756 aaKnown RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 CACHD1Q5VU97 1274 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 LRRC8EQ6NSJ5 796 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 FAM45BPQ6NSW5 357 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 FAM92BQ6ZTR7 304 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 STRA8Q7Z7C7 330 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 CLEC14AQ86T13 490 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms