RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RGS5O15539 181 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 TULP3O75386 442 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 FDXRP22570 491 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 SCNN1AP37088 669 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 TGFBR2P37173 567 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 CASP9P55211 416 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 SCAPQ12770 1279 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 CCDC71Q8IV32 467 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-204ENST00000438964 PHF10Q8WUB8 498 aaKnown RBP13.14□□□□□ -0.31
ACTN1-204ENST00000438964 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 LPPQ93052 612 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 FUBP1Q96AE4 644 aaKnown RBP13.14□□□□□ -0.31
ACTN1-204ENST00000438964 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 ZNF599Q96NL3 588 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 NECTIN3Q9NQS3 549 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 NEU3Q9UQ49 428 aa13.14□□□□□ -0.31
ACTN1-204ENST00000438964 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 DSCR3O14972 297 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 LDB2O43679 373 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 KCTD2Q14681 263 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ZCCHC8Q6NZY4 707 aaKnown RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 BHLHA9Q7RTU4 235 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 GALNT12Q8IXK2 581 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ASCC1Q8N9N2 400 aaKnown RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 GOLM1Q8NBJ4 401 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 MTMR14Q8NCE2 650 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ZNF548Q8NEK5 533 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 DNASE1L2Q92874 299 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 KLRG1Q96E93 195 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 IRF2BPLQ9H1B7 796 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 MMP28Q9H239 520 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 CPNE5Q9HCH3 593 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 FBXL12Q9NXK8 326 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 EHD3Q9NZN3 535 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ELOVL7A1L3X0 281 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ZSCAN5BA6NJL1 495 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 NAT1P18440 290 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 AQP1P29972 269 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 IRF3Q14653 427 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PTCHD3Q3KNS1 767 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ZFP69Q49AA0 526 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 Q5BKY6 102 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 NEK5Q6P3R8 708 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 MSRB3Q8IXL7 192 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 C3orf58Q8NDZ4 430 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SENP8Q96LD8 212 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 C8orf4Q9NR00 106 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 OSGIN1Q9UJX0 560 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PCTPQ9UKL6 214 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PCDHGA12O60330 932 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 CHRM5P08912 532 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SLAMF1Q13291 335 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SLC14A1Q13336 389 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 MAPKAPK3Q16644 382 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 NDUFA5Q16718 116 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PTPRNQ16849 979 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SETMARQ53H47 684 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 ALFQ53S48 1182 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 RIOX2Q8IUF8 465 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SLC38A6Q8IZM9 456 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 TTC29Q8NA56 475 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-204ENST00000438964 IL17RDQ8NFM7 739 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 OR7G1Q8NGA0 311 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 GPR152Q8TDT2 470 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 KCNC2Q96PR1 638 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 SLC9A7Q96T83 725 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 NUAK2Q9H093 628 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
ACTN1-204ENST00000438964 NYNRINQ9P2P1 1898 aaKnown RBP13.12□□□□□ -0.31
ACTN1-204ENST00000438964 KRT87PA6NCN2 255 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 PSMD3O43242 534 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 TLL1O43897 1013 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CACNG3O60359 315 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 MGEA5O60502 916 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 CREG1O75629 220 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 NDST3O95803 873 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 WEE1P30291 646 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 S100A5P33763 92 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 VGLL4Q14135 290 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 SPATA19Q7Z5L4 167 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 ZDHHC21Q8IVQ6 265 aa13.12□□□□□ -0.31
ACTN1-204ENST00000438964 OR6F1Q8NGZ6 308 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms