RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 LRRC72A6NJI9 287 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 SOCS5O75159 536 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ENTPD3O75355 529 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 SELLP14151 372 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 MMP9P14780 707 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 S1PR1P21453 382 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 SAT1P21673 171 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ACADLP28330 430 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CORO1AP31146 461 aaKnown RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 APOBEC1P41238 236 aaKnown RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMPOP42166 694 aaKnown RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 GPR143P51810 404 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CLDN20P56880 219 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CD81P60033 236 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ISL1P61371 349 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 FKBP1BP68106 108 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 COG7P83436 770 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 RELQ04864 619 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 EPS8Q12929 822 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 AIMP2Q13155 320 aaKnown RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 KCNC3Q14003 757 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 PCGF3Q3KNV8 242 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 SOWAHCQ53LP3 525 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 BMP2KLQ5H9B9 411 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 PLEKHS1Q5SXH7 462 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 MFSD4BQ5TF39 518 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 STPG1Q5TH74 334 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 FRG2Q64ET8 278 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 TRNP1Q6NT89 227 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 OLFM4Q6UX06 510 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 GDPD4Q6W3E5 623 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 RAD9BQ6WBX8 426 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 KBTBD6Q86V97 674 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 C1orf87Q8N0U7 546 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMTC2Q8N394 836 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CCDC89Q8N998 374 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CNBD1Q8NA66 436 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 UTP15Q8TED0 518 aaKnown RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLC20A1Q8WUM9 679 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 MOAP1Q96BY2 351 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CDCA5Q96FF9 252 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 UHRF2Q96PU4 802 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 DDOQ99489 341 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 TRMT61BQ9BVS5 477 aaKnown RBP3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZFP57Q9NU63 452 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ARHGEF38Q9NXL2 777 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ACSL5Q9ULC5 683 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 PADI1Q9ULC6 663 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 SNX8Q9Y5X2 465 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 FER1L6Q2WGJ9 1857 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 CDHR2Q9BYE9 1310 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 DLEC1Q9Y238 1755 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MRC1P22897 1456 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 OR2A25A4D2G3 310 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 ERVV-2B6SEH9 535 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 P2RY10O00398 339 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 ANKRD28O15084 1053 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 PPIP5K2O43314 1243 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MITFO75030 526 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 RSL1D1O76021 490 aaKnown RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZWINTO95229 277 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 PAK4O96013 591 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 CRYAAP02489 173 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 ACTN1P12814 892 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 CDH1P12830 882 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MYOD1P15172 320 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MARK3P27448 753 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 TIMP3P35625 211 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 KRT20P35900 424 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 GNL1P36915 607 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 RAD52P43351 418 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 UBXN2AP68543 259 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 KRT33BQ14525 404 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 CCDC6Q16204 474 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 DECR1Q16698 335 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MRGPRG-AS1Q2M3A8 158 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 C18orf63Q68DL7 685 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 PRR5LQ6MZQ0 368 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 DSG4Q86SJ6 1040 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 TSPAN33Q86UF1 283 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 NRROSQ86YC3 692 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 ARID3BQ8IVW6 561 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAP7D3Q8IWC1 876 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 SCML4Q8N228 414 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 EMC1Q8N766 993 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 KBTBD3Q8NAB2 608 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 IL17RCQ8NAC3 791 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 APPL2Q8NEU8 664 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 OR5R1Q8NH85 324 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 TAAR8Q969N4 342 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 SIL1Q9H173 461 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 RAD21L1Q9H4I0 556 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 ANKEF1Q9NU02 776 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MRPL15Q9P015 296 aaKnown RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 CHORDC1Q9UHD1 332 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 NARFQ9UHQ1 456 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 DBNLQ9UJU6 430 aaKnown RBP3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 PCDHGA5Q9Y5G8 931 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAGED1Q9Y5V3 778 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms