RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 FGGP02679 453 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 CTAGE8P0CG41 777 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 POLR2CP19387 275 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 HADHAP40939 763 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 FOLR3P41439 243 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 MARCKSL1P49006 195 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 DMPKQ09013 629 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 SSPNQ14714 243 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 PCSK7Q16549 785 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 ATP13A5Q4VNC0 1218 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 ATP13A4Q4VNC1 1196 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 MLIPQ5VWP3 458 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 SPOCD1Q6ZMY3 1216 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 FAM83HQ6ZRV2 1179 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 ZNF572Q7Z3I7 529 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 GDF7Q7Z4P5 450 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 CTAGE6Q86UF2 777 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 FJX1Q86VR8 437 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 CTAGE4Q8IX94 777 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 CCNYQ8ND76 341 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 C12orf66Q96MD2 445 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 WDR77Q9BQA1 342 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 ZNF670Q9BS34 389 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 OSBPL8Q9BZF1 889 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 ZCCHC2Q9C0B9 1178 aaKnown RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 ZBTB20Q9HC78 741 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 SYTL2Q9HCH5 934 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 GPN3Q9UHW5 284 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 SLC24A2Q9UI40 661 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 SERTAD3Q9UJW9 196 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 TMPRSS11EQ9UL52 423 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
LINC01088-201ENST00000437737 SEC16AO15027 2179 aa13.66□□□□□ -0.22
LINC01088-201ENST00000437737 NUP210LQ5VU65 1888 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 OR2AG2A6NM03 316 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 E7EQ34 232 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 CCDC188H7C350 402 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 E2F3O00716 465 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 SLU7O95391 586 aaKnown RBP13.65□□□□□ -0.22
LINC01088-201ENST00000437737 HBQ1P09105 142 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 EDN3P14138 238 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 HLA-DPA1P20036 260 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 MX2P20592 715 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 CDKN2BP42772 138 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 ARSEP51690 589 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 TAZQ16635 292 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 ZNF789Q5FWF6 425 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 CCDC70Q6NSX1 233 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 B4GALNT4Q76KP1 1039 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
LINC01088-201ENST00000437737 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.65□□□□□ -0.22
LINC01088-201ENST00000437737 GRHL3Q8TE85 626 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 MS4A14Q96JA4 679 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 TRAPPC9Q96Q05 1148 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 TRIB3Q96RU7 358 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 INSM2Q96T92 566 aaPredicted RBP13.65□□□□□ -0.22
LINC01088-201ENST00000437737 C17orf62Q9BQA9 187 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 FRMD8P1Q9BZ68 369 aaPredicted RBP13.65□□□□□ -0.22
LINC01088-201ENST00000437737 WWP1Q9H0M0 922 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 P4HTMQ9NXG6 502 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 PTRH2Q9Y3E5 179 aaKnown RBP13.65□□□□□ -0.22
LINC01088-201ENST00000437737 CSAG2Q9Y5P2 127 aa13.65□□□□□ -0.22
LINC01088-201ENST00000437737 PCM1Q15154 2024 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 PDZD2O15018 2839 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 hCG_1818297A0A087WSY0 165 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 A0A1B0GUH1 482 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 GSAPA4D1B5 854 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 C3orf70A6NLC5 250 aaPredicted RBP13.64□□□□□ -0.23
LINC01088-201ENST00000437737 KCNK1O00180 336 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 MASP2O00187 686 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 ZNF749O43361 778 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 KLF7O75840 302 aaPredicted RBP13.64□□□□□ -0.23
LINC01088-201ENST00000437737 LMAN1P49257 510 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 CTSCP53634 463 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 CDC16Q13042 620 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 DPYSL3Q14195 570 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 KRT33BQ14525 404 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 HIF1AQ16665 826 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 CYP2A13Q16696 494 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 TMEM220Q6QAJ8 160 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 MFSD7Q6UXD7 560 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 BZW1Q7L1Q6 419 aaKnown RBP13.64□□□□□ -0.23
LINC01088-201ENST00000437737 RASGEF1AQ8N9B8 481 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 OR4E2Q8NGC2 313 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 ZFPM2Q8WW38 1151 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 HDAC11Q96DB2 347 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 LURAP1Q96LR2 239 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 RUNDC3BQ96NL0 473 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 KIR3DX1Q9H7L2 352 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 ATP13A2Q9NQ11 1180 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 FEZ2Q9UHY8 353 aaPredicted RBP13.64□□□□□ -0.23
LINC01088-201ENST00000437737 POMT2Q9UKY4 750 aa13.64□□□□□ -0.23
LINC01088-201ENST00000437737 MED13LQ71F56 2210 aa13.63□□□□□ -0.23
LINC01088-201ENST00000437737 MATN2O00339 956 aa13.63□□□□□ -0.23
LINC01088-201ENST00000437737 AURKAO14965 403 aa13.63□□□□□ -0.23
LINC01088-201ENST00000437737 ZNF189O75820 626 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms