RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 HM13Q8TCT9 377 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 P3H4Q92791 437 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 ELMO2Q96JJ3 720 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 C12orf66Q96MD2 445 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 SRMSQ9H3Y6 488 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 ACTR5Q9H9F9 607 aaPredicted RBP8.04□□□□□ -1.12
CDH13-203ENST00000431540 PCMTD2Q9NV79 361 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 ZNHIT6Q9NWK9 470 aaKnown RBP8.04□□□□□ -1.12
CDH13-203ENST00000431540 SRPK3Q9UPE1 567 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 NBPF19A0A087WUL8 3843 aa8.04□□□□□ -1.12
CDH13-203ENST00000431540 IGLV3-16A0A075B6K0 115 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 OR6C74A6NCV1 312 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 H7C0S8 307 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 IFRD1O00458 451 aaPredicted RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 GAPDHSO14556 408 aaPredicted RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 PCDH17O14917 1159 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 AURKAO14965 403 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 PSTPIP1O43586 416 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 PMPCBO75439 489 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 DNAJB5O75953 348 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SRP72O76094 671 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 AP2A2O94973 939 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 ATP1B2P14415 290 aaPredicted RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 CYP2A7P20853 494 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 ITGA3P26006 1051 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 UQCRFS1P47985 274 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 KPNA2P52292 529 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 CTSCP53634 463 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 ARSFP54793 590 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 GEMP55040 296 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 FANCCQ00597 558 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 WASHC5Q12768 1159 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 NFE2L1Q14494 772 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 KRT33BQ14525 404 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 PCSK7Q16549 785 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SLC5A12Q1EHB4 618 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 PLEKHN1Q494U1 663 aaPredicted RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 ZNF789Q5FWF6 425 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 TFDP3Q5H9I0 405 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 DCAF10Q5QP82 559 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 B3GNTL1Q67FW5 361 aaPredicted RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 ITPRIPL1Q6GPH6 555 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 Q6ZS92 163 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 PID1Q7Z2X4 250 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SNX20Q7Z614 316 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SYTL1Q8IYJ3 562 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 GALNT16Q8N428 558 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH13-203ENST00000431540 ST6GALNAC3Q8NDV1 305 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 GPR150Q8NGU9 434 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 OR2Y1Q8NGV0 311 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SPATA22Q8NHS9 363 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 UBE2Q2Q8WVN8 375 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 LCN9Q8WX39 176 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SNRNP40Q96DI7 357 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 DCUN1D1Q96GG9 259 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 TRAPPC9Q96Q05 1148 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 DNAJC7Q99615 494 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 NUDT9Q9BW91 350 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 WDR54Q9H977 334 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 ARFGAP3Q9NP61 516 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 LUC7LQ9NQ29 371 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 IMP3Q9NV31 184 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 SOHLH2Q9NX45 425 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 OR6C2Q9NZP2 312 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH13-203ENST00000431540 SPO11Q9Y5K1 396 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 COPG1Q9Y678 874 aaKnown RBP8.03□□□□□ -1.12
CDH13-203ENST00000431540 GTF3C1Q12789 2109 aa8.03□□□□□ -1.12
CDH13-203ENST00000431540 HEATR5BQ9P2D3 2071 aa8.02□□□□□ -1.12
CDH13-203ENST00000431540 APCP25054 2843 aa8.02□□□□□ -1.12
CDH13-203ENST00000431540 SCN2AQ99250 2005 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 A0A1B0GUH1 482 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 ANKUB1A6NFN9 424 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 OR2AG2A6NM03 316 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 H3BMH7 237 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 LIN7AO14910 233 aaPredicted RBP8.02□□□□□ -1.13
CDH13-203ENST00000431540 UGT1A9O60656 530 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 MTX2O75431 263 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 ZRANB2O95218 330 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDH13-203ENST00000431540 PRAMEF1O95521 474 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 PIRTP0C851 137 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 UGT1A6P19224 532 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 UGT1A1P22309 533 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 UGT1A4P22310 534 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 PSMA3P25788 255 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 SHMT2P34897 504 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 CDKN2BP42772 138 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 DCDP81605 110 aaKnown RBP8.02□□□□□ -1.13
CDH13-203ENST00000431540 MESDQ14696 234 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 KCNAB1Q14722 419 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 GPR19Q15760 415 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 EIF2S3LQ2VIR3 472 aaKnown RBP8.02□□□□□ -1.13
CDH13-203ENST00000431540 FNBP1LQ5T0N5 605 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 FAM198BQ6UWH4 519 aa8.02□□□□□ -1.13
CDH13-203ENST00000431540 FAM83HQ6ZRV2 1179 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms