RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 IL17BQ9UHF5 180 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 KCND3Q9UK17 655 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 CROTQ9UKG9 612 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 PADI1Q9ULC6 663 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 BTRCQ9Y297 605 aa17.07■□□□□ 0.32
NUP50-208ENST00000430547 SLC5A10A0PJK1 596 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 SLC9B1P1A6NJY1 282 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 PGRMC1O00264 195 aaKnown RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 BTN3A3O00478 584 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 PRMT5O14744 637 aaPredicted RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 PFDN6O15212 129 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 NKX2-8O15522 239 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 CPNE3O75131 537 aaKnown RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 KATNA1O75449 491 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 NDUFS3O75489 264 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 SCRG1O75711 98 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 TIAF1O95411 115 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 KRT14P02533 472 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 APOA4P06727 396 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 NMBRP28336 390 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 PRDX3P30048 256 aaKnown RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 CCR10P46092 362 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 HSPA14Q0VDF9 509 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 SEMA3AQ14563 771 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 PTRHD1Q6GMV3 140 aaKnown RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 C16orf46Q6P387 395 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 FBXO38Q6PIJ6 1188 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 MPP5Q8N3R9 675 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 RASGEF1CQ8N431 466 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 EXD3Q8N9H8 876 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 OR5K2Q8NHB8 316 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 GSDMBQ8TAX9 411 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
NUP50-208ENST00000430547 MS4A14Q96JA4 679 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 PPM1MQ96MI6 270 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 CARD6Q9BX69 1037 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 AP1M1Q9BXS5 423 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 KCND1Q9NSA2 647 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 TREX1Q9NSU2 369 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 SYBUQ9NX95 663 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 GNPTGQ9UJJ9 305 aa17.06■□□□□ 0.32
NUP50-208ENST00000430547 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 PIPSLA2A3N6 862 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 KIF5CO60282 957 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 NTRK1P04629 796 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 RPN2P04844 631 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 ACADLP28330 430 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 DNAJC21Q5F1R6 531 aaKnown RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 MRNIPQ6NTE8 343 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 CASC4Q6P4E1 433 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 ZNF501Q96CX3 271 aaPredicted RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 PANX3Q96QZ0 392 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 FAM117AQ9C073 453 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 MRM3Q9HC36 420 aaKnown RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 SYTL2Q9HCH5 934 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 LHX9Q9NQ69 397 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 ACTR10Q9NZ32 417 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 SAMD15Q9P1V8 674 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 ICKQ9UPZ9 632 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 HEMK1Q9Y5R4 338 aaPredicted RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 MRPS18BQ9Y676 258 aaKnown RBP17.05■□□□□ 0.32
NUP50-208ENST00000430547 CFAP46Q8IYW2 2715 aa17.05■□□□□ 0.32
NUP50-208ENST00000430547 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.04■□□□□ 0.32
NUP50-208ENST00000430547 B8ZZF3 427 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 BHMG1C9JSJ3 638 aaPredicted RBP17.04■□□□□ 0.32
NUP50-208ENST00000430547 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
NUP50-208ENST00000430547 VAPBO95292 243 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SPTBP11277 2137 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 ST6GAL1P15907 406 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 PAMP19021 973 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 CCR7P32248 378 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 POLE2P56282 527 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 NFATC3Q12968 1075 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 DNASE1L3Q13609 305 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 KCNJ11Q14654 390 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 TTC27Q6P3X3 843 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SPESP1Q6UW49 350 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SDCCAG8Q86SQ7 713 aaPredicted RBP17.04■□□□□ 0.32
NUP50-208ENST00000430547 LRRC6Q86X45 466 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SLC22A15Q8IZD6 547 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 ADGRF3Q8IZF5 1079 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SLC35F6Q8N357 371 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 CPT1BQ92523 772 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 N4BP2L2Q92802 583 aaPredicted RBP17.04■□□□□ 0.32
NUP50-208ENST00000430547 MFSD3Q96ES6 412 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 KIFC1Q9BW19 673 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 PITPNM3Q9BZ71 974 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SLC7A5P2Q9GIP4 190 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 ADNPQ9H2P0 1102 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 LATS2Q9NRM7 1088 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 SOX13Q9UN79 622 aa17.04■□□□□ 0.32
NUP50-208ENST00000430547 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
NUP50-208ENST00000430547 TCRBV7S3A2A0A539 114 aa17.03■□□□□ 0.32
NUP50-208ENST00000430547 IQCF5A8MTL0 148 aa17.03■□□□□ 0.32
NUP50-208ENST00000430547 C21orf140B9A014 251 aa17.03■□□□□ 0.32
NUP50-208ENST00000430547 TMEM150CB9EJG8 249 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms