RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 HJURPQ8NCD3 748 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 STARD8Q92502 1023 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 DEPDC7Q96QD5 511 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 COPS4Q9BT78 406 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 SEZ6LQ9BYH1 1024 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 BRD9Q9H8M2 597 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 RAPGEFL1Q9UHV5 662 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 SCML2Q9UQR0 700 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 EFCAB9A8MZ26 197 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 LOC730098B7Z3J9 87 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 H3BMQ9 156 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 PRAMEF11O60813 436 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 ARCN1P48444 511 aaKnown RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 HTR6P50406 440 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 RAB15P59190 212 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 VBP1P61758 197 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 SNRPD1P62314 119 aaKnown RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 NFKB2Q00653 900 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 NFATC3Q12968 1075 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 COG8Q96MW5 612 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 MTERF1Q99551 399 aaKnown RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 TMEM245Q9H330 911 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 DNAJC11Q9NVH1 559 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 FNIP2Q9P278 1114 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 TNFRSF11BO00300 401 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 STX16O14662 325 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 HTR1EP28566 365 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 GRB14Q14449 540 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 COLEC12Q5KU26 742 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 KRT73Q86Y46 540 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 CNIH3Q8TBE1 160 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 TSPEARQ8WU66 669 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 L3HYPDHQ96EM0 354 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 TREX1Q9NSU2 369 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 KLHL20Q9Y2M5 609 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 NME7Q9Y5B8 376 aa12.4□□□□□ -0.42
CPNE4-201ENST00000429747 MAGED1Q9Y5V3 778 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-201ENST00000429747 CYP7B1O75881 506 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 GLUD1P00367 558 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 FLT3LGP49771 235 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 BCAP31P51572 246 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 CLCN2P51788 898 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 ELP6Q0PNE2 266 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 GALNT1Q10472 559 aaPredicted RBP12.4□□□□□ -0.43
CPNE4-201ENST00000429747 NAE1Q13564 534 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 USP39Q53GS9 565 aaKnown RBP12.4□□□□□ -0.43
CPNE4-201ENST00000429747 OR4F3Q6IEY1 312 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 TRAPPC5Q8IUR0 188 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 C19orf18Q8NEA5 215 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 TRIM45Q9H8W5 580 aaPredicted RBP12.4□□□□□ -0.43
CPNE4-201ENST00000429747 OLAHQ9NV23 265 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 CLN6Q9NWW5 311 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.43
CPNE4-201ENST00000429747 LOC110117498-PIK3R3F6TDL0 507 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 PER2O15055 1255 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 IDH3BO43837 385 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CD1EP15812 388 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 AZGP1P25311 298 aaKnown RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 SPAM1P38567 509 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 RXRGP48443 463 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 INHBCP55103 352 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 LRRC73Q5JTD7 316 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 PSAPL1Q6NUJ1 521 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 NANOGNBQ7Z5D8 188 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ZNF598Q86UK7 904 aaKnown RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 NAA50Q9GZZ1 169 aaKnown RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 MAGEE1Q9HCI5 957 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 NUP205Q92621 2012 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 STRCQ7RTU9 1775 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 H0YAE9 185 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 TSC22D2O75157 780 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ERN1O75460 977 aaKnown RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ATE1O95260 518 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 EPOP01588 193 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 UGT2B4P06133 528 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 PRPS2P11908 318 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 APLP1P51693 650 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 PURAQ00577 322 aaKnown RBP12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ACOX1Q15067 660 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CES5AQ6NT32 575 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 FUT10Q6P4F1 479 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 BORAQ6PGQ7 559 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 KDELC1Q6UW63 502 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CARM1Q86X55 608 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 OR4A15Q8NGL6 344 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 TMEM125Q96AQ2 219 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ENOPH1Q9UHY7 261 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 CD84Q9UIB8 345 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 VPS4AQ9UN37 437 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ERGIC3Q9Y282 383 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ACTL7AQ9Y615 435 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 ANKDD1BA6NHY2 528 aa12.39□□□□□ -0.43
CPNE4-201ENST00000429747 MAGEB17A8MXT2 336 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms