RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 METTL21EPA6NDL7 271 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 PITPNM1O00562 1244 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ADAMDEC1O15204 470 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 TULP3O75386 442 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 TGDSO95455 350 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 PSMA1P25786 263 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 ARRB1P49407 418 aaPredicted RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 EIF2S3LQ2VIR3 472 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 CWF19L1Q69YN2 538 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 ADNP2Q6IQ32 1131 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 TMEM17Q86X19 198 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 GKN2Q86XP6 184 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ECHDC2Q86YB7 292 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 HDAC7Q8WUI4 952 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 SLC25A36Q96CQ1 311 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 DGCR14Q96DF8 476 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 SCLYQ96I15 445 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ZNF514Q96K75 400 aaPredicted RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 WDR26Q9H7D7 661 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 NOL11Q9H8H0 719 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 PCDH18Q9HCL0 1135 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 FAM240BA0A1B0GVZ2 78 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ILVBLA1L0T0 632 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 SCAMP1O15126 338 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 DDX3YO15523 660 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 NRP2O60462 931 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CILPO75339 1184 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 TRAPPC6AO75865 159 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ACRP10323 421 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ADRA1BP35368 520 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ACTR1BP42025 376 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ACTR1AP61163 376 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 BTN3A2P78410 334 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CHAF1BQ13112 559 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CHIT1Q13231 466 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 DPYSQ14117 519 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 TMEM44Q2T9K0 475 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 UBAP2Q5T6F2 1119 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 METTL21CQ5VZV1 264 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 AMZ2Q86W34 360 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 SERPINA9Q86WD7 417 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CEP97Q8IW35 865 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 PARP8Q8N3A8 854 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 DBF4BQ8NFT6 615 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 SNX27Q96L92 541 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 KXD1Q9BQD3 176 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 GPATCH1Q9BRR8 931 aaKnown RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 RTKNQ9BST9 563 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 SPEF1Q9Y4P9 236 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ELOVL7A1L3X0 281 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 PI15O43692 258 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 NME6O75414 186 aaPredicted RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 PLEKHG4Q58EX7 1191 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ALG10Q5BKT4 473 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 GPR107Q5VW38 600 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 GLYATQ6IB77 296 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 IRF2BP2Q7Z5L9 587 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 GALNT5Q7Z7M9 940 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 AMIGO2Q86SJ2 522 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 PLCZ1Q86YW0 608 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CREG2Q8IUH2 290 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CENPSQ8N2Z9 138 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 JOSD2Q8TAC2 188 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 ZBED6CLQ96FA7 236 aaPredicted RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 CEP295NLQ96MC4 621 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 LRRC19Q9H756 370 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 SRRDQ9UH36 339 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CIDEBQ9UHD4 219 aa8.8□□□□□ -1
CTNND1-208ENST00000428599 CORO1CQ9ULV4 474 aaPredicted RBP8.8□□□□□ -1
CTNND1-208ENST00000428599 NID2Q14112 1375 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 SMCO3A2RU48 225 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 SLC38A8A6NNN8 435 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 EOMESO95936 686 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 FAM153BP0C7A2 387 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 DCKP27707 260 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 MARCKSL1P49006 195 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PDGFRLQ15198 375 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 AAK1Q2M2I8 961 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 ACBD6Q9BR61 282 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 KLRF1Q9NZS2 232 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 U3KQV3 271 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 A0A0U1RQJ8 604 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 RBM47A0AV96 593 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 DUXAA6NLW8 204 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 BCKDKO14874 412 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 MUSKO15146 869 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 BANF1O75531 89 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 NR4A1P22736 598 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PTX3P26022 381 aaPredicted RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 TIE1P35590 1138 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 NDST2P52849 883 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 GHRHRQ02643 423 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 PLET1Q6UQ28 207 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 LCLAT1Q6UWP7 414 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 ISLR2Q6UXK2 745 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 TWIST2Q8WVJ9 160 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 B3GALT6Q96L58 329 aa8.79□□□□□ -1
CTNND1-208ENST00000428599 CARS2Q9HA77 564 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 RC3H2Q9HBD1 1191 aaKnown RBP8.79□□□□□ -1
CTNND1-208ENST00000428599 ABCB9Q9NP78 766 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms