RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PSMD3O43242 534 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MAFO75444 373 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 SRP72O76094 671 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 CPN2P22792 545 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 LIPAP38571 399 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 ARL4AP40617 200 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PLK1P53350 603 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 BCAT1P54687 386 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 OR4D2P58180 307 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MRPS15P82914 257 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 SP2Q02086 613 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 LCP2Q13094 533 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GRB7Q14451 532 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GRK1Q15835 563 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TTLL9Q3SXZ7 439 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PCID2Q5JVF3 399 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PPP1R26Q5T8A7 1209 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 ESRP1Q6NXG1 681 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 CDAN1Q8IWY9 1227 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GLB1L3Q8NCI6 653 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 IPCEF1Q8WWN9 437 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 SNAPC3Q92966 411 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 ATXN7L3BQ96GX2 97 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TMEM80Q96HE8 168 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 METTL2AQ96IZ6 378 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 KLHL15Q96M94 604 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SLC30A2Q9BRI3 323 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MLPHQ9BV36 600 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 CDT1Q9H211 546 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 KCNN2Q9H2S1 579 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PAQR5Q9NXK6 330 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 NDOR1Q9UHB4 597 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 POLG2Q9UHN1 485 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 STUB1Q9UNE7 303 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 ZDBF2Q9HCK1 2354 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 VPS26AO75436 327 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SLITRK5O94991 958 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PGK2P07205 417 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MAD2L1BPQ15013 274 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 SOWAHAQ2M3V2 549 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 LAMTOR1Q6IAA8 161 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 FAHD1Q6P587 224 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TMEM179BQ7Z7N9 219 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MTMR14Q8NCE2 650 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SMG7Q92540 1137 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 KIAA1191Q96A73 305 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TMEM143Q96AN5 459 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MSLNLQ96KJ4 702 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SOSTQ9BQB4 213 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 NARFLQ9H6Q4 476 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CARS2Q9HA77 564 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 TOR4AQ9NXH8 423 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 KCNH4Q9UQ05 1017 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PKP3Q9Y446 797 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 RNF215Q9Y6U7 377 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CCRL2O00421 344 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CTDSP2O14595 271 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PROM1O43490 865 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SNX2O60749 519 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 HUS1O60921 280 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GDF11O95390 407 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 HOXA9P31269 272 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CSTF2P33240 577 aaKnown RBP eCLIP5.05□□□□□ -1.6
RIF1-203ENST00000428287 PRPSAP1Q14558 356 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 ZNF79Q15937 498 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CDO1Q16878 200 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 TXNDC11Q6PKC3 985 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 MPZL3Q6UWV2 235 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 EXOC8Q8IYI6 725 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CADM2Q8N3J6 435 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CEP295NLQ96MC4 621 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 NUSAP1Q9BXS6 441 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 ZNF717Q9BY31 904 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 SRRQ9GZT4 340 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 INTS7Q9NVH2 962 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 FZD10Q9ULW2 581 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 BTRCQ9Y297 605 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 WDFY4Q6ZS81 3184 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 FAM95CA0A1B0GW59 222 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 RPS10-NUDT3A0A1W2PQS6 291 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 B4DXG7 233 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 XPNPEP2O43895 674 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 KPNA6O60684 536 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 RPS17P08708 135 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 GABRB1P18505 474 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 CFL1P23528 166 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 CTBP1Q13363 440 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 EFR3AQ14156 821 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 IRF3Q14653 427 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 DPY19L3Q6ZPD9 716 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 KCTD20Q7Z5Y7 419 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 EID3Q8N140 333 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 LILRB1Q8NHL6 650 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 WBP1Q96G27 269 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SCYL1Q96KG9 808 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PRMT6Q96LA8 375 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 GAD1Q99259 594 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 PPP1R3EQ9H7J1 279 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 ENTPD7Q9NQZ7 604 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms