RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SPTA1P02549 2419 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 CEP104O60308 925 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 PRDX3P30048 256 aaKnown RBP17.85■□□□□ 0.45
PSPC1-202ENST00000427943 SESN2P58004 480 aaPredicted RBP17.85■□□□□ 0.45
PSPC1-202ENST00000427943 CRADDP78560 199 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 PRAMEF17Q5VTA0 474 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 LYPLAL1Q5VWZ2 237 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 GSTA5Q7RTV2 222 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 LDB1Q86U70 411 aaPredicted RBP17.85■□□□□ 0.45
PSPC1-202ENST00000427943 TMEM135Q86UB9 458 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 BPHLQ86WA6 291 aaPredicted RBP17.85■□□□□ 0.45
PSPC1-202ENST00000427943 ADGRF3Q8IZF5 1079 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 TRIM58Q8NG06 486 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 LKAAEAR1Q8TD35 194 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 APOBEC4Q8WW27 367 aaKnown RBP17.85■□□□□ 0.45
PSPC1-202ENST00000427943 FCRL4Q96PJ5 515 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 KCND1Q9NSA2 647 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 ACTR10Q9NZ32 417 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 KCND3Q9UK17 655 aa17.85■□□□□ 0.45
PSPC1-202ENST00000427943 TDRKHQ9Y2W6 561 aaKnown RBP17.85■□□□□ 0.45
PSPC1-202ENST00000427943 SLC5A10A0PJK1 596 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 CDC14CA4D256 554 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 C2orf74A8MZ97 194 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 CPNE3O75131 537 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 ACADLP28330 430 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 RPS18P62269 152 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 ABRQ12979 859 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 GPS2Q13227 327 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 CRTC2Q53ET0 693 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 FASTKD1Q53R41 847 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 DRICH1Q6PGQ1 229 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 NLRP9Q7RTR0 991 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 TRIM73Q86UV7 250 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 PTRH1Q86Y79 214 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 TTC1Q99614 292 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 ACTL8Q9H568 366 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 FANCEQ9HB96 536 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 EIF2B3Q9NR50 452 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 CHRAC1Q9NRG0 131 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 CATSPERZQ9NTU4 200 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 MARCH4Q9P2E8 410 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 PLAGL1Q9UM63 463 aa17.84■□□□□ 0.45
PSPC1-202ENST00000427943 DRG1Q9Y295 367 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 TNRC6AQ8NDV7 1962 aaKnown RBP17.84■□□□□ 0.45
PSPC1-202ENST00000427943 CCDC88CQ9P219 2028 aa17.83■□□□□ 0.45
PSPC1-202ENST00000427943 IQCF5A8MTL0 148 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 TMEM150CB9EJG8 249 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 BHMG1C9JSJ3 638 aaPredicted RBP17.83■□□□□ 0.44
PSPC1-202ENST00000427943 CREG1O75629 220 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 CCR7P32248 378 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 TERF1P54274 439 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 PCID2Q5JVF3 399 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 SLC38A9Q8NBW4 561 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 OR8K5Q8NH50 307 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 OR1L3Q8NH93 324 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 C9orf43Q8TAL5 461 aaPredicted RBP17.83■□□□□ 0.44
PSPC1-202ENST00000427943 MAIP1Q8WWC4 291 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 TRAPPC9Q96Q05 1148 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 PITPNM3Q9BZ71 974 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 TWSG1Q9GZX9 223 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 ZNF71Q9NQZ8 489 aaPredicted RBP17.83■□□□□ 0.44
PSPC1-202ENST00000427943 TUBD1Q9UJT1 453 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 ZKSCAN5Q9Y2L8 839 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 PPP2R2CQ9Y2T4 447 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 PCDHGA6Q9Y5G7 932 aa17.83■□□□□ 0.44
PSPC1-202ENST00000427943 PIPSLA2A3N6 862 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 C21orf140B9A014 251 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 TPBGLP0DKB5 382 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 SHMT2P34897 504 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 SPESP1Q6UW49 350 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 UNC5AQ6ZN44 842 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 VRK3Q8IV63 474 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 TBC1D21Q8IYX1 336 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 KRT222Q8N1A0 295 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 OR5K2Q8NHB8 316 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 PEX13Q92968 403 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 MR1Q95460 341 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 LATS2Q9NRM7 1088 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 SPHK1Q9NYA1 384 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 ANAPC5Q9UJX4 755 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 TTC7AQ9ULT0 858 aaPredicted RBP17.82■□□□□ 0.44
PSPC1-202ENST00000427943 POLHQ9Y253 713 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 KCNMB2Q9Y691 235 aa17.82■□□□□ 0.44
PSPC1-202ENST00000427943 SUV39H1O43463 412 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 UGT2B7P16662 529 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 CYP2A7P20853 494 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 MGAT1P26572 445 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 NMBRP28336 390 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 VPS41P49754 854 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 HSPA14Q0VDF9 509 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 TRIP13Q15645 432 aaPredicted RBP17.81■□□□□ 0.44
PSPC1-202ENST00000427943 AARS2Q5JTZ9 985 aaKnown RBP17.81■□□□□ 0.44
PSPC1-202ENST00000427943 C4orf22Q6V702 233 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 ATG14Q6ZNE5 492 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 CDHR3Q6ZTQ4 885 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 HOOK3Q86VS8 718 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 PRELID2Q8N945 189 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 CPT1BQ92523 772 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 CLIP3Q96DZ5 547 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 ABHD17AQ96GS6 310 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms