RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SELENOFO60613 162 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 AGFG2O95081 481 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 NKX2-2O95096 273 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SPDEFO95238 335 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PGLSO95336 258 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CXCL14O95715 111 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SERPINA3P01011 423 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 OPN1LWP04000 364 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 LCATP04180 440 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FHP07954 510 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PRR23D2P0DMB1 279 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 HKR1P10072 659 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CLUP10909 449 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 LYL1P12980 280 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 F3P13726 295 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FOSL2P15408 326 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF18P17022 549 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF182P17025 639 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TNNI3P19429 210 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FUT1P19526 365 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 NCF2P19878 526 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CYP3A7P24462 503 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 U2AF2P26368 475 aaKnown RBP eCLIP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ALDH1B1P30837 517 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 UQCRC1P31930 480 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CSTF2P33240 577 aaKnown RBP eCLIP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SUOXP51687 545 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SMSP52788 366 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 EFNA5P52803 228 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ARSFP54793 590 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CLRN1P58418 232 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TAS2R40P59535 323 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SIRPAP78324 504 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 MRPS15P82914 257 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ECT2LQ008S8 904 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PIGFQ07326 219 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TP53BP2Q13625 1128 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 COTL1Q14019 142 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FGFBP1Q14512 234 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 IL13RA2Q14627 380 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 VEPH1Q14D04 833 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SLC39A14Q15043 492 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 RNPS1Q15287 305 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 HIST2H2ACQ16777 129 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ST3GAL2Q16842 350 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 VWC2Q2TAL6 325 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 Q3ZCU0 254 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FSCBQ5H9T9 825 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 C9orf50Q5SZB4 431 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 STRIP1Q5VSL9 837 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 METRNLQ641Q3 311 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FAM90A2PQ658T7 463 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TXNRD3NBQ6F5E7 133 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM211Q6ICI0 200 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 OR7E24Q6IFN5 339 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 NAPEPLDQ6IQ20 393 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SLC27A1Q6PCB7 646 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM88Q6PEY1 159 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 KIAA1324Q6UXG2 1013 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 WDR5BQ86VZ2 330 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ZDHHC21Q8IVQ6 265 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 NKAIN4Q8IVV8 208 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SLC15A3Q8IY34 581 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SRRM1Q8IYB3 904 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 GHDCQ8N2G8 530 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 NECAB1Q8N987 351 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 L3MBTL4Q8NA19 623 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF397Q8NF99 534 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CLEC4CQ8WTT0 213 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 DDI1Q8WTU0 396 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CKAP2Q8WWK9 683 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 LINC00476Q8WZB0 136 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FIG4Q92562 907 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CAVIN3Q969G5 261 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 HMCESQ96FZ2 354 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ZBED3Q96IU2 234 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FAM71F1Q96KD3 344 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 MTMR9Q96QG7 549 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SMOQ99835 787 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 VKORC1Q9BQB6 163 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM79Q9BSE2 394 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 MMTAG2Q9BU76 263 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 MRPL37Q9BZE1 423 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 CDT1Q9H211 546 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 SLCO5A1Q9H2Y9 848 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 VCX3BQ9H321 246 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM245Q9H330 911 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 HIPK3Q9H422 1215 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TDRD3Q9H7E2 651 aaKnown RBP3.63□□□□□ -1.83
SF3B1-205ENST00000424674 METTL7AQ9H8H3 244 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 LMAN1LQ9HAT1 526 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 EPB41L5Q9HCM4 733 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 TRIM36Q9NQ86 728 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ENTPD7Q9NQZ7 604 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PAG1Q9NWQ8 432 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 KLHL28Q9NXS3 571 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 ETAA1Q9NY74 926 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PLK2Q9NYY3 685 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 FAM30AQ9NZY2 134 aa3.63□□□□□ -1.83
SF3B1-205ENST00000424674 PTGFRNQ9P2B2 879 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms