RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 RWDD2BP57060 319 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 RPA4Q13156 261 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 SPARCL1Q14515 664 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 PTCHD3Q3KNS1 767 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 LCN10Q6JVE6 187 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 SERPINA9Q86WD7 417 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 AMIGO1Q86WK6 493 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 RAB43Q86YS6 212 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 GPR135Q8IZ08 494 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 SPC24Q8NBT2 197 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 ACRBPQ8NEB7 543 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 ADAMTS17Q8TE56 1095 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 PITPNM3Q9BZ71 974 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 KLHL25Q9H0H3 589 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 MAP10Q9P2G4 905 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 PCDHGB7Q9Y5F8 929 aa15.66■□□□□ 0.1
COL18A1-205ENST00000423214 BTN3A3O00478 584 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 LDB2O43679 373 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 HBQ1P09105 142 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 GSTM1P09488 218 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 PVRP15151 417 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 AGXTP21549 392 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 PDHA2P29803 388 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 GSTM4Q03013 218 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 NCF4Q15080 339 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 SYTL3Q4VX76 610 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 ZNF789Q5FWF6 425 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 FHL5Q5TD97 284 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 PAPD7Q5XG87 772 aaKnown RBP15.65■□□□□ 0.1
COL18A1-205ENST00000423214 DENND5AQ6IQ26 1287 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 MED25Q71SY5 747 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 HPS6Q86YV9 775 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 TMEM102Q8N9M5 508 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-205ENST00000423214 PHC3Q8NDX5 983 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 TFGQ92734 400 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-205ENST00000423214 TRAPPC9Q96Q05 1148 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 ALS2CR12Q96Q35 445 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 DPH2Q9BQC3 489 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-205ENST00000423214 LACRTQ9GZZ8 138 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 TFB2MQ9H5Q4 396 aaKnown RBP15.65■□□□□ 0.1
COL18A1-205ENST00000423214 XKR8Q9H6D3 395 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 ARNT2Q9HBZ2 717 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 GPR83Q9NYM4 423 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 ACTR10Q9NZ32 417 aa15.65■□□□□ 0.1
COL18A1-205ENST00000423214 TRBV5-4A0A0C4DH59 114 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 GOLGA6L9A6NEM1 432 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 A6NL46 340 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 H7C0S8 307 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 QSOX1O00391 747 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 ZNF185O15231 689 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 CEACAM4O75871 244 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SORBS2O94875 1100 aaKnown RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SHMT2P34897 504 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 CDKN1CP49918 316 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 CACNG1Q06432 222 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 PRKG2Q13237 762 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 MSLNQ13421 630 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 ATP1A4Q13733 1029 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 BOP1Q14137 746 aaKnown RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 POU6F1Q14863 301 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 FAM69BQ5VUD6 431 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SPESP1Q6UW49 350 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 C19orf47Q8N9M1 422 aaKnown RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 FDCSPQ8NFU4 85 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 PCSK5Q92824 1860 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 DOCK10Q96BY6 2186 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SGSM3Q96HU1 749 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 PSMG3-AS1Q96PY0 264 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 BAG1Q99933 345 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 C17orf62Q9BQA9 187 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SLC29A3Q9BZD2 475 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 LRRC40Q9H9A6 602 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 MLXIPLQ9NP71 852 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SLAMF7Q9NQ25 335 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 NLE1Q9NVX2 485 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 SMARCAL1Q9NZC9 954 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 GPN3Q9UHW5 284 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-205ENST00000423214 ASF1AQ9Y294 204 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 NBPF19A0A087WUL8 3843 aa15.64■□□□□ 0.09
COL18A1-205ENST00000423214 LIN7AO14910 233 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-205ENST00000423214 ZNF749O43361 778 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 AP2A2O94973 939 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 FTH1P02794 183 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 PRSS56P0CW18 603 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 OTX2P32243 289 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 DBN1Q16643 649 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 KYNUQ16719 465 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 P3H1Q32P28 736 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 ZNF658BQ4V348 819 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-205ENST00000423214 AADACL2Q6P093 401 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 CDHR3Q6ZTQ4 885 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 TRIM73Q86UV7 250 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 ADGRF3Q8IZF5 1079 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 CLDN19Q8N6F1 224 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 TTC13Q8NBP0 860 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 OR5AR1Q8NGP9 310 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 STYXQ8WUJ0 223 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 ELMO1Q92556 727 aa15.63■□□□□ 0.09
COL18A1-205ENST00000423214 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL18A1-205ENST00000423214 NRTNQ99748 197 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms