RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 SPACA3Q8IXA5 215 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 SLC22A15Q8IZD6 547 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 ACVR1CQ8NER5 493 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 IFT81Q8WYA0 676 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 CDKL2Q92772 493 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 KCNJ9Q92806 393 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 ATXN7L3BQ96GX2 97 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 NAF1Q96HR8 494 aaKnown RBP13□□□□□ -0.33
TMEM248-203ENST00000418375 LATS2Q9NRM7 1088 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 THSD1Q9NS62 852 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 NSMCE4AQ9NXX6 385 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 MOCS1Q9NZB8 636 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 AKAP7Q9P0M2 348 aaPredicted RBP13□□□□□ -0.33
TMEM248-203ENST00000418375 KLHL42Q9P2K6 505 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 SLC24A2Q9UI40 661 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 SATB2Q9UPW6 733 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 ENTPD2Q9Y5L3 495 aa13□□□□□ -0.33
TMEM248-203ENST00000418375 BPTFQ12830 3046 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 KDM1AO60341 852 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 VPS26AO75436 327 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 SPAG6O75602 509 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 RPN2P04844 631 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 F7P08709 466 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 TYRP1P17643 537 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 RBMS1P29558 406 aaKnown RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 ATP5DP30049 168 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 SSTR1P30872 391 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 CSF2RBP32927 897 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 PDX1P52945 283 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 LIMK2P53671 638 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 ZFP36L1Q07352 338 aaKnown RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 ILF2Q12905 390 aaKnown RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 CUL1Q13616 776 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 UGT3A1Q6NUS8 523 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 IGF2-ASQ6U949 168 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 C3orf62Q6ZUJ4 267 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 B3GNT8Q7Z7M8 397 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 SLC26A11Q86WA9 606 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 VRK3Q8IV63 474 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 IFT20Q8IY31 132 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 TBC1D21Q8IYX1 336 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 ZBTB2Q8N680 514 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 PHC3Q8NDX5 983 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 SKA2Q8WVK7 121 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 FAM136AQ96C01 138 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 LIN37Q96GY3 246 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 C9orf72Q96LT7 481 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 FOPNLQ96NB1 174 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 FMO2Q99518 471 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 AARSD1Q9BTE6 412 aaKnown RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 TRIT1Q9H3H1 467 aaKnown RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 ASCL3Q9NQ33 180 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 POLG2Q9UHN1 485 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 CORO1CQ9ULV4 474 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-203ENST00000418375 CDYLQ9Y232 598 aa12.99□□□□□ -0.33
TMEM248-203ENST00000418375 CCDC187A0A096LP49 1063 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 IGHV5-10-1A0A0J9YXX1 117 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 AHSGP02765 367 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 CAPZBP47756 277 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 CLCN7P51798 805 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 CFHR1Q03591 330 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 ABRQ12979 859 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 BROXQ5VW32 411 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 ARMC6Q6NXE6 501 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 ZNF549Q6P9A3 640 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 TTC23LQ6PF05 361 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 UNC5DQ6UXZ4 953 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 ZNF574Q6ZN55 896 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-203ENST00000418375 CYS1Q717R9 158 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 GPR155Q7Z3F1 870 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 TMPRSS9Q7Z410 1059 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 OOSP2Q86WS3 158 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 OR5AR1Q8NGP9 310 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 OR5K2Q8NHB8 316 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 KCNE4Q8WWG9 221 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 LCN9Q8WX39 176 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 JPH3Q8WXH2 748 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-203ENST00000418375 ZDHHC12Q96GR4 267 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 CCDC74BQ96LY2 380 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 SLC46A1Q96NT5 459 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 CMKLR1Q99788 373 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 HGH1Q9BTY7 390 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 TAS2R13Q9NYV9 303 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 OGFRQ9NZT2 677 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 TXNDC16Q9P2K2 825 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 SLC17A6Q9P2U8 582 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 DHRS7Q9Y394 339 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 PCDHGA8Q9Y5G5 932 aa12.98□□□□□ -0.33
TMEM248-203ENST00000418375 SMG1Q96Q15 3661 aaKnown RBP12.98□□□□□ -0.33
TMEM248-203ENST00000418375 PIKFYVEQ9Y2I7 2098 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 A0A1W2PNU3 283 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 HGSO14964 777 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 RHOXF2BP0C7M4 288 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 THRAP10827 490 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 GABRB3P28472 473 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms