RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CTU2Q2VPK5 515 aaKnown RBP11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PERM1Q5SV97 790 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 APCDD1Q8J025 514 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 TTPALQ9BTX7 342 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 RIBC2Q9H4K1 309 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 RNF186Q9NXI6 227 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 NUDT4Q9NZJ9 180 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 IL17CQ9P0M4 197 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 VPS51Q9UID3 782 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 DLGAP4Q9Y2H0 992 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 hCG_2039718K7EN88 272 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 TBC1D4O60343 1298 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 SEC24AO95486 1093 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 EOMESO95936 686 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PFKLP17858 780 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 GGT1P19440 569 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 TACR1P25103 407 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 HLCSP50747 726 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 BMXP51813 675 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 RGMBQ6NW40 437 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 BTLAQ7Z6A9 289 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 THAP5Q7Z6K1 395 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ADAMTSL2Q86TH1 951 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 SLC15A4Q8N697 577 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 NETO1Q8TDF5 533 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 GTF2H4Q92759 462 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PEX13Q92968 403 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 FAM120BQ96EK7 910 aaKnown RBP11.66□□□□□ -0.54
LIMK1-202ENST00000418310 MYO19Q96H55 970 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PARVBQ9HBI1 364 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
LIMK1-202ENST00000418310 DHRS7Q9Y394 339 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 PIKFYVEQ9Y2I7 2098 aa11.66□□□□□ -0.54
LIMK1-202ENST00000418310 ELOVL7A1L3X0 281 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 FAM92AA1XBS5 289 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 INMTO95050 263 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 F11P03951 625 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 UMPSP11172 480 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF7P17097 686 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ITPKAP23677 461 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CD47Q08722 323 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 BOP1Q14137 746 aaKnown RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 NR1D2Q14995 579 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CHRNA6Q15825 494 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 BROXQ5VW32 411 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ANKRD26P1Q6NSI1 321 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 DEFB128Q7Z7B8 93 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF555Q8NEP9 628 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ACDQ96AP0 544 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ATG10Q9H0Y0 220 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ZFYVE1Q9HBF4 777 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 LRTM1Q9HBL6 345 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 VPS9D1Q9Y2B5 631 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 TYW5A2RUC4 315 aaKnown RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 AQP1P29972 269 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CDKN2CP42773 168 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CCL23P55773 120 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CACNG1Q06432 222 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 TSTA3Q13630 321 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 COQ5Q5HYK3 327 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 RNF180Q86T96 592 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 RIMKLAQ8IXN7 391 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ARL14EPQ8N8R7 260 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.549e-9■■■■■ 29.7
LIMK1-202ENST00000418310 ISG20Q96AZ6 181 aaKnown RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 PLEKHA8Q96JA3 519 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CSF3RQ99062 836 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 BBS2Q9BXC9 721 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ARL15Q9NXU5 204 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 TRPM5Q9NZQ8 1165 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 PTBP2Q9UKA9 531 aaKnown RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ILVBLA1L0T0 632 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 GALTP07902 379 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 GJA1P17302 382 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 RGS4P49798 205 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 PLA2G16P53816 162 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ADGRF1Q5T601 910 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 TXNDC8Q6A555 127 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 ZNF773Q6PK81 442 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 MSRB3Q8IXL7 192 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 SELENOMQ8WWX9 145 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 FATE1Q969F0 183 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 APOLD1Q96LR9 279 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 IL26Q9NPH9 171 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 STARD7Q9NQZ5 370 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 RASSF1Q9NS23 344 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 FAM118AQ9NWS6 357 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-202ENST00000418310 IL37Q9NZH6 218 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 CLEC4EQ9ULY5 219 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 NEUROG3Q9Y4Z2 214 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 PCDHB14Q9Y5E9 798 aa11.65□□□□□ -0.54
LIMK1-202ENST00000418310 K7EPI3 171 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ANKRD28O15084 1053 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 RGS14O43566 566 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 KLK8O60259 260 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 OCM2P0CE71 109 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms