RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ADAMTS16Q8TE57 1224 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HSPBAP1Q96EW2 488 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TOR3AQ9H497 397 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EVPLLA8MZ36 301 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NOBOXO60393 691 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NBNO60934 754 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PRKD3O94806 890 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CKMP06732 381 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EBLN1P0CF75 366 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RPIAP49247 311 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RGL4Q8IZJ4 473 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SVOPLQ8N434 492 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DCAF4L2Q8NA75 395 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BPIFB6Q8NFQ5 453 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 AURKBQ96GD4 344 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF583Q96ND8 569 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FARSBQ9NSD9 589 aaKnown RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MAGED1Q9Y5V3 778 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 H3BMQ9 156 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 WDR47O94967 919 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RPS3P23396 243 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PSMA3P25788 255 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EPHB3P54753 998 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ADARB1P78563 741 aaKnown RBP11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HSPA14Q0VDF9 509 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CHRNA6Q15825 494 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GPR33Q49SQ1 333 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NECAB2Q7Z6G3 386 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CDC26Q8NHZ8 85 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SNRNP27Q8WVK2 155 aaKnown RBP11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM169Q96HH4 297 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 COG8Q96MW5 612 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RDH12Q96NR8 316 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TUBA1CQ9BQE3 449 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GORASP2Q9H8Y8 452 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SMURF2Q9HAU4 748 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IL26Q9NPH9 171 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KCTD5Q9NXV2 234 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM9Q9P0T7 183 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 YIPF1Q9Y548 306 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 U3KQV3 271 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TRBC1P01850 177 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ALPLP05186 524 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ACRV1P26436 265 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MAPK1P28482 360 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GKP32189 559 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C21orf59P57076 290 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 AAK1Q2M2I8 961 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ENPP6Q6UWR7 440 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GTF2H4Q92759 462 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TSSK3Q96PN8 268 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 COPS8Q99627 209 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KLF16Q9BXK1 252 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ACTL8Q9H568 366 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SNX6Q9UNH7 406 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PTGES3LE9PB15 166 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MANBAO00462 879 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 B4GAT1O43505 415 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ATE1O95260 518 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZNF682O95780 498 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GSNP06396 782 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NSG1P42857 185 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TM4SF4P48230 202 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PPP3CCP48454 512 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 IST1P53990 364 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RPS14P62263 151 aaKnown RBP11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 LAPTM5Q13571 262 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PYCR3Q53H96 274 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RBM48Q5RL73 367 aaKnown RBP11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KLHL35Q6PF15 583 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ITIH5Q86UX2 942 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MICU2Q8IYU8 434 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ARL14EPQ8N8R7 260 aaPredicted RBP11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RHBDF1Q96CC6 855 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DGCR6LQ9BY27 220 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ABCG8Q9H221 673 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PDE10AQ9Y233 779 aa11.46□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TRIM64CA6NLI5 447 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ERN1O75460 977 aaKnown RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SEC24AO95486 1093 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HPRP00739 348 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HNF1BP35680 557 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PPP1R8Q12972 351 aaKnown RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GTF2H3Q13889 308 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PLA2G4EQ3MJ16 856 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FGD3Q5JSP0 725 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DNAJB7Q7Z6W7 309 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RIMKLAQ8IXN7 391 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PHACTR4Q8IZ21 702 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PIH1D2Q8WWB5 315 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BORCS5Q969J3 196 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms