RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 AIFM2Q9BRQ8 373 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ACAD9Q9H845 621 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF70Q9UC06 446 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 UNCXA6NJT0 531 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 I6L893 689 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 CRCPO75575 148 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SLITRK5O94991 958 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 GJB1P08034 283 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SERPINH1P50454 418 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 AIF1P55008 147 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SCAPQ12770 1279 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 FAPQ12884 760 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM214AQ32MH5 1076 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ARMC4Q5T2S8 1044 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 CPZQ66K79 652 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF767PQ75MW2 155 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 DET1Q7L5Y6 550 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PLCZ1Q86YW0 608 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ST13P5Q8NFI4 369 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NTAN1Q96AB6 310 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 C18orf25Q96B23 403 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ATG4CQ96DT6 458 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 Q96MT0 163 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF599Q96NL3 588 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 TSGA13Q96PP4 275 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 FCRL5Q96RD9 977 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NUSAP1Q9BXS6 441 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 RETREG1Q9H6L5 497 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NUFIP1Q9UHK0 495 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 LOC100506127A0A0U1RQW1 187 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ANKRD28O15084 1053 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 WBP4O75554 376 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SCELO95171 688 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 CAPN1P07384 714 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 RETP07949 1114 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 MSH3P20585 1137 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ADRA1AP35348 466 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PTGS2P35354 604 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 MLLT3P42568 568 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 C5orf22Q49AR2 442 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PIK3R6Q5UE93 754 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 DPY19L3Q6ZPD9 716 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 UNC93AQ86WB7 457 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM126BQ8IXS8 530 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 OR2T11Q8NH01 316 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SH3RF2Q8TEC5 729 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM162AQ96A26 154 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 TMEM39BQ9GZU3 492 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 RNF167Q9H6Y7 350 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 DCAF13Q9NV06 445 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 MAT2BQ9NZL9 334 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ZBTB42B2RXF5 422 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 CXCR6O00574 342 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PGK2P07205 417 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 GSTM1P09488 218 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 HOXD10P28358 340 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 TIE1P35590 1138 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SOX6P35712 828 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 CHRNA4P43681 627 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 NKX3-2P78367 333 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 EFR3AQ14156 821 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 OR4D1Q15615 310 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SOWAHCQ53LP3 525 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SYPL2Q5VXT5 272 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 KDM4DQ6B0I6 523 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SYVN1Q86TM6 617 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 CILP2Q8IUL8 1156 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 TCTE3Q8IZS6 198 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PNPLA1Q8N8W4 532 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 OR6B3Q8NGW1 331 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 VNN3Q9NY84 501 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 VAPAQ9P0L0 249 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 MICAL3Q7RTP6 2002 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ELOVL7A1L3X0 281 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 LEUTXA8MZ59 168 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC7A4O43246 635 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 EGFRP00533 1210 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 HOXB6P17509 224 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 IL12RB1P42701 662 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 DAPP51397 102 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 CSNK2BP67870 215 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ADIGQ0VDE8 80 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 TNK1Q13470 666 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 IRF3Q14653 427 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PON2Q15165 354 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 TOR2AQ5JU69 321 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 C6orf136Q5SQH8 315 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 XKRXQ6PP77 449 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 OR4M1Q8NGD0 313 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 OR10A6Q8NH74 314 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 RHEBL1Q8TAI7 183 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PPP1R13LQ8WUF5 828 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 PABPC5Q96DU9 382 aaKnown RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM167AQ96KS9 214 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ATOH8Q96SQ7 321 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 OR51E2Q9H255 320 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF556Q9HAH1 456 aa7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 SEMA4BQ9NPR2 832 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-202ENST00000418170 EVPLQ92817 2033 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TFECO14948 347 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms