RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 RFX8Q6ZV50 586 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 LRRTM4Q86VH4 590 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 KMT5CQ86Y97 462 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 WFDC11Q8NEX6 87 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 LPCAT1Q8NF37 534 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 OR2Y1Q8NGV0 311 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 SMARCE1Q969G3 411 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 THOC3Q96J01 351 aaKnown RBP8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 AGAP4Q96P64 663 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 SNRNP25Q9BV90 132 aaKnown RBP8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 TRIM39Q9HCM9 518 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 RMND1Q9NWS8 449 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 SEC14L3Q9UDX4 400 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 PCSK1NQ9UHG2 260 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 ADAM21Q9UKJ8 722 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 AP4E1Q9UPM8 1137 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 LUC7L2Q9Y383 392 aaKnown RBP8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 HRNRQ86YZ3 2850 aaPredicted RBP8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 HCFC1P51610 2035 aa8.34□□□□□ -1.07
NIF3L1-206ENST00000416651 ATRQ13535 2644 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 C1orf232A0A0U1RR37 186 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 CCDC66A2RUB6 948 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 C9J4A7 227 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 BTN3A3O00478 584 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 ADAM10O14672 748 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 KMOO15229 486 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 SLC19A2O60779 497 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 MTA2O94776 668 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 IDSP22304 550 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 HADHAP40939 763 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 PREPP48147 710 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 RENBPP51606 427 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 PPP2R2AP63151 447 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 AIMP2Q13155 320 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 NFE2L1Q14494 772 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 RFTN1Q14699 578 aaPredicted RBP8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 ZIC1Q15915 447 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 CYP2A13Q16696 494 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 ATL3Q6DD88 541 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 RPUSD3Q6P087 351 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 CYB5D1Q6P9G0 228 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 TMEM200AQ86VY9 491 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 LILRA3Q8N6C8 439 aaPredicted RBP8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 OR4E2Q8NGC2 313 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 OR8K5Q8NH50 307 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 SPATA3Q8NHX4 192 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 PTERQ96BW5 349 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 MCEEQ96PE7 176 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 FOXC2Q99958 501 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 TIMM29Q9BSF4 260 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 SPATA16Q9BXB7 569 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 NAA15Q9BXJ9 866 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 UCK2Q9BZX2 261 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 TRIM7Q9C029 511 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 DEF6Q9H4E7 631 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 CWC15Q9P013 229 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 MEMO1Q9Y316 297 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 RNF114Q9Y508 228 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 HS3ST3B1Q9Y662 390 aa8.33□□□□□ -1.08
NIF3L1-206ENST00000416651 NKX2-6A6NCS4 301 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 GFPT2O94808 682 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 LSM8O95777 96 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 GHRHP01286 108 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 SLC4A1P02730 911 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 PYGLP06737 847 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 C8BP07358 591 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 TCF4P15884 667 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 ZNF30P17039 623 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 IGFBP2P18065 325 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 CDH3P22223 829 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 PBLDP30039 288 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 MMP13P45452 471 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 GABRA4P48169 554 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 ZNF143P52747 638 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 EPHB1P54762 984 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 HSF1Q00613 529 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 ITKQ08881 620 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 MFAP5Q13361 173 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 DPYSQ14117 519 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 PPP6R3Q5H9R7 873 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 TMTC4Q5T4D3 741 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 WASH2PQ6VEQ5 465 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 MICALCLQ6ZW33 695 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 TRIM73Q86UV7 250 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 ARRDC2Q8TBH0 407 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 PSMF1Q92530 271 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 GLYATL1Q969I3 302 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 SELENOOQ9BVL4 669 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 WWP1Q9H0M0 922 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 AKTIPQ9H8T0 292 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 IMP3Q9NV31 184 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 TMEM51Q9NW97 253 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 FAM8A1Q9UBU6 413 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 SHOC2Q9UQ13 582 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 PLEKHA6Q9Y2H5 1048 aa8.32□□□□□ -1.08
NIF3L1-206ENST00000416651 A0A1W2PQ67 120 aa8.31□□□□□ -1.08
NIF3L1-206ENST00000416651 SIGLEC16A6NMB1 481 aa8.31□□□□□ -1.08
NIF3L1-206ENST00000416651 E7EQ34 232 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms