RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CTSHP09668 335 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 HSMCR30P0CW71 290 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 TGFBR2P37173 567 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 FCHO2Q0JRZ9 810 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 CRHR2Q13324 411 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 CDONQ4KMG0 1287 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 PRSS36Q5K4E3 855 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 RAB43Q86YS6 212 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 ADHFE1Q8IWW8 467 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 TMEM40Q8WWA1 233 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 CDADC1Q9BWV3 514 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 TNFSF13BQ9Y275 285 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 PCDHGB1Q9Y5G3 927 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 A0A0X1KG70 313 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SCO1O75880 301 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SEMA3DO95025 777 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 BMP1P13497 986 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 CTGFP29279 349 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 ADRA1BP35368 520 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 MAP2K5Q13163 448 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 TP53BP2Q13625 1128 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 COQ5Q5HYK3 327 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 OTUD1Q5VV17 481 aaPredicted RBP14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 UBE2J2Q8N2K1 259 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SVOPLQ8N434 492 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SETD9Q8NE22 299 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 L3HYPDHQ96EM0 354 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 BARD1Q99728 777 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 MKRN2Q9H000 416 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 NXF3Q9H4D5 531 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 DUSP21Q9H596 190 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SLA2Q9H6Q3 261 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 AIG1Q9NVV5 245 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 POLR3BQ9NW08 1133 aaPredicted RBP14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 RNF6Q9Y252 685 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 KLHL20Q9Y2M5 609 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 LRRC37A2A6NM11 1700 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 A0A0G2JMP0 313 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 DFNA5O60443 496 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 GGT1P19440 569 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 ACVR2AP27037 513 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 EPHA2P29317 976 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 RYKP34925 604 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SLC26A3P40879 764 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 MADCAM1Q13477 382 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 NECAB2Q7Z6G3 386 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 SLC38A4Q969I6 547 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 ITPAQ9BY32 194 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 MMP28Q9H239 520 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 TMEFF2Q9UIK5 374 aaPredicted RBP14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 DNMT3LQ9UJW3 386 aa14.45□□□□□ -0.1
NCKIPSD-204ENST00000416649 I6L893 689 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 hCG_2039718K7EN88 272 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 CTDSP2O14595 271 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 DSCR3O14972 297 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 KATNA1O75449 491 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 TSPAN9O75954 239 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 YES1P07947 543 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 HOXD8P13378 290 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 CYP2A7P20853 494 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 GRIK1P39086 918 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 SNRPD2P62316 118 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 PRKG2Q13237 762 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 SPATS1Q496A3 300 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 KANK2Q63ZY3 851 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 SYCE2Q6PIF2 218 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 NOXA1Q86UR1 476 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 TRIM48Q8IWZ4 208 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 DTX3Q8N9I9 347 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 OR5K1Q8NHB7 308 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 OR51E2Q9H255 320 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 C12orf4Q9NQ89 552 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 AASDHPPTQ9NRN7 309 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 AGO1Q9UL18 857 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 PIN4Q9Y237 131 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 AAR2Q9Y312 384 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 PKP3Q9Y446 797 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 SCN1AP35498 2009 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 A0A096LPI6 279 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 CBLP22681 906 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 C21orf33P30042 268 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 CTSKP43235 329 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 CLCN5P51795 746 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 STARD3Q14849 445 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 ARHGEF6Q15052 776 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 CYP4Z1Q86W10 505 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 FAM109AQ8N4B1 249 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 GTF3C2Q8WUA4 911 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 GTF2H4Q92759 462 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 TRNT1Q96Q11 434 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 RGS18Q9NS28 235 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 SMPD4Q9NXE4 827 aa14.44□□□□□ -0.1
NCKIPSD-204ENST00000416649 NCAM2O15394 837 aa14.43□□□□□ -0.1
NCKIPSD-204ENST00000416649 DIRAS1O95057 198 aa14.43□□□□□ -0.1
NCKIPSD-204ENST00000416649 UQCRC1P31930 480 aa14.43□□□□□ -0.1
NCKIPSD-204ENST00000416649 FKBP1BP68106 108 aa14.43□□□□□ -0.1
NCKIPSD-204ENST00000416649 OR4D1Q15615 310 aa14.43□□□□□ -0.1
NCKIPSD-204ENST00000416649 PXDC1Q5TGL8 231 aa14.43□□□□□ -0.1
NCKIPSD-204ENST00000416649 CXCL17Q6UXB2 119 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms