RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TLR10Q9BXR5 811 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 PITPNM3Q9BZ71 974 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 PAK5Q9P286 719 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 POLG2Q9UHN1 485 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 SERTAD3Q9UJW9 196 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 ASF1AQ9Y294 204 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 MAN2B2Q9Y2E5 1009 aa17.06■□□□□ 0.32
PDLIM2-208ENST00000416159 SLC5A10A0PJK1 596 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 RFPL1O75677 317 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 GOT2P00505 430 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 ST6GAL1P15907 406 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 ACADLP28330 430 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 PPARGP37231 505 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 CASRP41180 1078 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 GPS2Q13227 327 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 SNX1Q13596 522 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 UGT8Q16880 541 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 PLEKHS1Q5SXH7 462 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 MEI1Q5TIA1 1274 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 TCTN3Q6NUS6 607 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 ZNF517Q6ZMY9 492 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 HOOK3Q86VS8 718 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 TBC1D21Q8IYX1 336 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 CCDC89Q8N998 374 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 THAP4Q8WY91 577 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 PEX13Q92968 403 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 TRAPPC9Q96Q05 1148 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 XKR8Q9H6D3 395 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 CASS4Q9NQ75 786 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 RAB6BQ9NRW1 208 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 ACTR10Q9NZ32 417 aa17.05■□□□□ 0.32
PDLIM2-208ENST00000416159 TMEM150CB9EJG8 249 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 MEN1O00255 615 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 ARHGAP6O43182 974 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 KDM1AO60341 852 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 ETS1P14921 441 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 SHMT2P34897 504 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 GRIA1P42261 906 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 PMS2P54278 862 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 ACVR1Q04771 509 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 BRD3Q15059 726 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 SYTL3Q4VX76 610 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 FASTKD1Q53R41 847 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 IZUMO3Q5VZ72 239 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 TMEM135Q86UB9 458 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 APLFQ8IW19 511 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 DSELQ8IZU8 1212 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 SLC38A9Q8NBW4 561 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 OR5AR1Q8NGP9 310 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 OR6P1Q8NGX9 317 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 OR4L1Q8NH43 312 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 OR1L3Q8NH93 324 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 CLIP3Q96DZ5 547 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 SGSM3Q96HU1 749 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 NRTNQ99748 197 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 CHST8Q9H2A9 424 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 SLC2A6Q9UGQ3 507 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 ICKQ9UPZ9 632 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 DRG1Q9Y295 367 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 TP53TG5Q9Y2B4 290 aa17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 FLNBO75369 2602 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-208ENST00000416159 HBQ1P09105 142 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 RAB40ALP0C0E4 278 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 CYP2A7P20853 494 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 RPS18P62269 152 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 PRAMEP78395 509 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 KLRB1Q12918 225 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 ABRQ12979 859 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 CCNG2Q16589 344 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 PRAMEF17Q5VTA0 474 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 DRICH1Q6PGQ1 229 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 SPESP1Q6UW49 350 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 C4orf22Q6V702 233 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 UNC5AQ6ZN44 842 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 OR5K2Q8NHB8 316 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 TSSK1BQ9BXA7 367 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 EPN3Q9H201 632 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 ACTR5Q9H9F9 607 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 ANAPC5Q9UJX4 755 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 TLK1Q9UKI8 766 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 TCAF1Q9Y4C2 921 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 MYO18BQ8IUG5 2567 aa17.03■□□□□ 0.32
PDLIM2-208ENST00000416159 BOD1L1Q8NFC6 3051 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 BHMG1C9JSJ3 638 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 OR1I1O60431 355 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 APRTP07741 180 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 PVRP15151 417 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 RORAP35398 523 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 ITGA1P56199 1179 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 ZNF789Q5FWF6 425 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 PCID2Q5JVF3 399 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 NAPRTQ6XQN6 538 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 ZNF662Q6ZS27 426 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 ZNF534Q76KX8 674 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 PRUNE1Q86TP1 453 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 PPHLN1Q8NEY8 458 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 MAIP1Q8WWC4 291 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 TCTN2Q96GX1 697 aa17.02■□□□□ 0.32
PDLIM2-208ENST00000416159 ZNF778Q96MU6 729 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms