RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 BTKQ06187 659 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 WASHC5Q12768 1159 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 DNAJC3Q13217 504 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 C1orf61Q13536 156 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ARHGEF7Q14155 803 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 FZD2Q14332 565 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 WSCD2Q2TBF2 565 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 N4BP2L1Q5TBK1 243 aaPredicted RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 FAXCQ5TGI0 409 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 LRRC66Q68CR7 880 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 KCTD16Q68DU8 428 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 IL27RAQ6UWB1 636 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 KYAT3Q6YP21 454 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 BBS12Q6ZW61 710 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 CXXC5Q7LFL8 322 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ABI3BPQ7Z7G0 1075 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 TRIM74Q86UV6 250 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 VSIG1Q86XK7 387 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 LRRC49Q8IUZ0 686 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ZNF567Q8N184 647 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 TXLNBQ8N3L3 684 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 SLC25A41Q8N5S1 370 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 HCAR2Q8TDS4 363 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 HTR3CQ8WXA8 447 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ATG4AQ8WYN0 398 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 HOXB13Q92826 284 aaPredicted RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 RAB24Q969Q5 203 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 TSACCQ96A04 125 aaPredicted RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 FUBP1Q96AE4 644 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 SKA1Q96BD8 255 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 CENPTQ96BT3 561 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 NUS1Q96E22 293 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 HES6Q96HZ4 224 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 DMRTA2Q96SC8 542 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 TSGA10Q9BZW7 698 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ZMAT3Q9HA38 289 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 GLOD4Q9HC38 313 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 PCDH9Q9HC56 1237 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 MRPL40Q9NQ50 206 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 TRMT1Q9NXH9 659 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 MOSPD1Q9UJG1 213 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 R3HDM2Q9Y2K5 976 aaKnown RBP4.85□□□□□ -1.63
VPS41-205ENST00000414632 HS3ST3A1Q9Y663 406 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 CACNA1GO43497 2377 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 NCOR2Q9Y618 2525 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ASPMQ8IZT6 3477 aa4.85□□□□□ -1.63
VPS41-205ENST00000414632 ARID1BQ8NFD5 2236 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 PCNX2A6NKB5 2137 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 COL27A1Q8IZC6 1860 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 C1orf232A0A0U1RR37 186 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 TMEM202A6NGA9 273 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 USP27XA6NNY8 438 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MIF4GDA9UHW6 222 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 INPP4BO15327 924 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 FRS3O43559 492 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 SGTAO43765 313 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MAGEC1O60732 1142 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 USP12O75317 370 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 TJP3O95049 919 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 LY86O95711 162 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 LTA4HP09960 611 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 ATXN1LP0C7T5 689 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 TYRP1P17643 537 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 TNFSF4P23510 183 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 PSMB4P28070 264 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CXCR5P32302 372 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 PTPN7P35236 360 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 NUDT1P36639 197 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 ADCY8P40145 1251 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CETN2P41208 172 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 RABIFP47224 123 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 POLD2P49005 469 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 ARRB1P49407 418 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 PPM1FP49593 454 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 SUOXP51687 545 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 TERF1P54274 439 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 PFN3P60673 137 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 NKX6-1P78426 367 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 EIF2B5Q13144 721 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 SNX1Q13596 522 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SPARCL1Q14515 664 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 RPS6KA1Q15418 735 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 TRIP6Q15654 476 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 KHDC1Q4VXA5 237 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 TEX44Q53QW1 395 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SEL1L2Q5TEA6 688 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 ALS2CLQ60I27 953 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 RAET1GQ6H3X3 334 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 DOK6Q6PKX4 331 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CRTC1Q6UUV9 634 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 ENPP7Q6UWV6 458 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 Q6ZVL8 140 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MICALCLQ6ZW33 695 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 BZW1Q7L1Q6 419 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 PID1Q7Z2X4 250 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 PIP4P1Q86T03 277 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 PRUNE1Q86TP1 453 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms