RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 TMCO3Q6UWJ1 677 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 RSRC2Q7L4I2 434 aaKnown RBP4.58□□□□□ -1.68
ATG4C-204ENST00000414558 PIGZQ86VD9 579 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 MARVELD2Q8N4S9 558 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 RAB42Q8N4Z0 105 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 DYRK2Q92630 601 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 SAT2Q96F10 170 aaPredicted RBP4.58□□□□□ -1.68
ATG4C-204ENST00000414558 C18orf12Q96KH6 178 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 AGAP3Q96P47 875 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 C16orf70Q9BSU1 422 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 DCTN5Q9BTE1 182 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 LAT2Q9GZY6 243 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 ARRDC1-AS1Q9H2J1 176 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 LARSQ9P2J5 1176 aaKnown RBP4.58□□□□□ -1.68
ATG4C-204ENST00000414558 ZNF69Q9UC07 566 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 HACL1Q9UJ83 578 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 GRIP1Q9Y3R0 1128 aa4.58□□□□□ -1.68
ATG4C-204ENST00000414558 PTGES3LE9PB15 166 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 TRIM49P0CI25 452 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 TRIM49CP0CI26 452 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 HADHAP40939 763 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 SIRPAP78324 504 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 TMF1P82094 1093 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 CXCL9Q07325 125 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 NR1D2Q14995 579 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 HAUS6Q7Z4H7 955 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 KBTBD8Q8NFY9 601 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 MOSPD2Q8NHP6 518 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 OLIG1Q8TAK6 271 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 ZNRF4Q8WWF5 429 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 SPATC1LQ9H0A9 340 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 PPIL3Q9H2H8 161 aaKnown RBP4.57□□□□□ -1.68
ATG4C-204ENST00000414558 KCNK15Q9H427 330 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 A4GALTQ9NPC4 353 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 RNF186Q9NXI6 227 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 SEC63Q9UGP8 760 aaKnown RBP4.57□□□□□ -1.68
ATG4C-204ENST00000414558 RIPK3Q9Y572 518 aa4.57□□□□□ -1.68
ATG4C-204ENST00000414558 E9PQ18 207 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 AP3D1O14617 1153 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 PTP4A3O75365 173 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 KHDRBS3O75525 346 aaKnown RBP4.56□□□□□ -1.68
ATG4C-204ENST00000414558 KRTAP10-3P60369 221 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 HERV-K104P61576 105 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 IRF3Q14653 427 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 FAM114A1Q8IWE2 563 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 MAPKAPK5-AS1Q8N8E1 139 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 OR4C3Q8NH37 302 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 FAM222BQ8WU58 562 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 NEK1Q96PY6 1258 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 BTBD10Q9BSF8 475 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 SDR39U1Q9NRG7 319 aaPredicted RBP4.56□□□□□ -1.68
ATG4C-204ENST00000414558 ASIC3Q9UHC3 531 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 ZNF148Q9UQR1 794 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 SMCHD1A6NHR9 2005 aa4.56□□□□□ -1.68
ATG4C-204ENST00000414558 CACNA1FO60840 1977 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 HYKKA2RU49 373 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 B4DLN1 442 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 VILLO15195 856 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 PRAMEF11O60813 436 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 RNASEH1O60930 286 aaKnown RBP4.55□□□□□ -1.68
ATG4C-204ENST00000414558 BAIAP3O94812 1187 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 TNFAIP3P21580 790 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 SLC15A1P46059 708 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 MRPL12P52815 198 aaKnown RBP4.55□□□□□ -1.68
ATG4C-204ENST00000414558 DSCR10P59022 87 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 CDK3Q00526 305 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 XKR6Q5GH73 641 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 BSPRYQ5W0U4 402 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 FAM180BQ6P0A1 224 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 MAATS1Q7Z4T9 603 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 LDB1Q86U70 411 aaPredicted RBP4.55□□□□□ -1.68
ATG4C-204ENST00000414558 NIPA2Q8N8Q9 360 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 TRIML1Q8N9V2 468 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 FUCA2Q9BTY2 467 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 LMF2Q9BU23 707 aaKnown RBP4.55□□□□□ -1.68
ATG4C-204ENST00000414558 FNDC11Q9BVV2 318 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 CLEC7AQ9BXN2 247 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 MAK16Q9BXY0 300 aaKnown RBP4.55□□□□□ -1.68
ATG4C-204ENST00000414558 SYNCQ9H7C4 482 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 PLAGL1Q9UM63 463 aa4.55□□□□□ -1.68
ATG4C-204ENST00000414558 CREG1O75629 220 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 MOCS3O95396 460 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 GPIP06744 558 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 ACSL1P33121 698 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 NKX2-1P43699 371 aaPredicted RBP4.54□□□□□ -1.68
ATG4C-204ENST00000414558 PNLIPRP2P54317 469 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 DMPKQ09013 629 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 RAB41Q5JT25 222 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 DHRS7BQ6IAN0 325 aaPredicted RBP4.54□□□□□ -1.68
ATG4C-204ENST00000414558 COMMD2Q86X83 199 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 OR5AP2Q8NGF4 316 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 OR2AJ1Q8NGZ0 328 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 DPAGT1Q9H3H5 408 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 OSER1Q9NX31 292 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 ARHGEF38Q9NXL2 777 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 MTUS1Q9ULD2 1270 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 LAS1LQ9Y4W2 734 aaKnown RBP4.54□□□□□ -1.68
ATG4C-204ENST00000414558 NME7Q9Y5B8 376 aa4.54□□□□□ -1.68
ATG4C-204ENST00000414558 ZNF541Q9H0D2 1346 aa4.53□□□□□ -1.68
ATG4C-204ENST00000414558 HEPACAM2A8MVW5 462 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms