RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZNF624Q9P2J8 865 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 C9J4A7 227 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 TMCC2O75069 709 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 AP2A2O94973 939 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 MPIP34949 423 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 CTSKP43235 329 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF460Q14592 562 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 SLC39A5Q6ZMH5 540 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 WDR60Q8WVS4 1066 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 SNX7Q9UNH6 387 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 FAM159BA6NKW6 160 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF37AP17032 561 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 PRPS1L1P21108 318 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 AGXTP21549 392 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 GKN2Q86XP6 184 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 SMG8Q8ND04 991 aaKnown RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 GSTCDQ8NEC7 633 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 RNASE11Q8TAA1 199 aaKnown RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 PIH1D2Q8WWB5 315 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 DUSP26Q9BV47 211 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 XYLT2Q9H1B5 865 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 DNAJB4Q9UDY4 337 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 ADAMTS5Q9UNA0 930 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 POP7O75817 140 aaKnown RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 GIMD1P0DJR0 217 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 ATP12AP54707 1039 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 HSPB3Q12988 150 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 TAS1R3Q7RTX0 852 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 RGMAQ96B86 450 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 NECTIN4Q96NY8 510 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 PTPN18Q99952 460 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 CDADC1Q9BWV3 514 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 PAIP1Q9H074 479 aaKnown RBP16.97■□□□□ 0.31
PHRF1-202ENST00000413872 CDH22Q9UJ99 828 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 SH3GLB1Q9Y371 365 aa16.97■□□□□ 0.31
PHRF1-202ENST00000413872 FAM234BA2RU67 622 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 TNFRSF11BO00300 401 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 PCDH7O60245 1069 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 RHOP08100 348 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 ALDH4A1P30038 563 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 PIK3CBP42338 1070 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 SP140Q13342 867 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 PLEKHG6Q3KR16 790 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 COX18Q8N8Q8 333 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 TOR4AQ9NXH8 423 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 NFKBIL1Q9UBC1 381 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 SSR3Q9UNL2 185 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 AGR2O95994 175 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 TMPRSS11AQ6ZMR5 421 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 RBM15BQ8NDT2 890 aaKnown RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 GAL3ST4Q96RP7 486 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CLK4Q9HAZ1 481 aaKnown RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 OGDHLQ9ULD0 1010 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CNOT6Q9ULM6 557 aaKnown RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 ALOX12P18054 663 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CLCNKAP51800 687 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 SLBPQ14493 270 aaKnown RBP eCLIP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 SPIN4Q56A73 249 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 MZT2BQ6NZ67 158 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 ZDHHC24Q6UX98 284 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 KBTBD6Q86V97 674 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 RALGPS2Q86X27 583 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CADM2Q8N3J6 435 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 PIGXQ8TBF5 258 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CMTM7Q96FZ5 175 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 LENG8Q96PV6 779 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 GALNT8Q9NY28 637 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 RGS20O76081 388 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 PRKCGP05129 697 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 CSNK2A2P19784 350 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-202ENST00000413872 GATMP50440 423 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 TXNRD3NBQ6F5E7 133 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 FAM46DQ8NEK8 389 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 LPGAT1Q92604 370 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 DPYSL5Q9BPU6 564 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 HERC2P3Q9BVR0 1158 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 SLC2A11Q9BYW1 496 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 VPS29Q9UBQ0 182 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 AP4B1Q9Y6B7 739 aa16.96■□□□□ 0.31
PHRF1-202ENST00000413872 COCHO43405 550 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 MPZL2O60487 215 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 RPL5P46777 297 aaKnown RBP16.95■□□□□ 0.3
PHRF1-202ENST00000413872 NFKB2Q00653 900 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 OGDHQ02218 1023 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 SLC44A4Q53GD3 710 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 MPP4Q96JB8 637 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 FAM83CQ9BQN1 747 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 EBPLQ9BY08 206 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 EBF3Q9H4W6 596 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 DAPK2Q9UIK4 370 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 TELO2Q9Y4R8 837 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 CLDN7O95471 211 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 IDH3AP50213 366 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 EIF4HQ15056 248 aaKnown RBP16.95■□□□□ 0.3
PHRF1-202ENST00000413872 FBXO48Q5FWF7 155 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 MORN1Q5T089 497 aa16.95■□□□□ 0.3
PHRF1-202ENST00000413872 LRRC66Q68CR7 880 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms