RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	SLC40A1	Q9NP59	571 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	DLL3	Q9NYJ7	618 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.83	□□□□□ -0.36
SF1-206	ENST00000413725	POLG2	Q9UHN1	485 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	APOBEC2	Q9Y235	224 aa	Known RBP	12.83	□□□□□ -0.36
SF1-206	ENST00000413725	IQANK1	A0A1B0GTG1	560 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	SPAAR	A0A1B0GVQ0	90 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	LILRA5	A6NI73	299 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	KCNK5	O95279	499 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	MATN4	O95460	622 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CAT	P04040	527 aa	Known RBP	12.82	□□□□□ -0.36
SF1-206	ENST00000413725	NUDT17	P0C025	328 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	ZNF37A	P17032	561 aa	Predicted RBP	12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CRABP2	P29373	138 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CCNF	P41002	786 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	EPHA4	P54764	986 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	SIM1	P81133	766 aa	Predicted RBP	12.82	□□□□□ -0.36
SF1-206	ENST00000413725	E2F1	Q01094	437 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	IFFO1	Q0D2I5	559 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	BMPR2	Q13873	1038 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	GPR18	Q14330	331 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	ZNF460	Q14592	562 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	NR1D2	Q14995	579 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	TAF1B	Q53T94	588 aa	Predicted RBP	12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CCDC157	Q569K6	752 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	PERM1	Q5SV97	790 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	ADGRD1	Q6QNK2	874 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	RAPH1	Q70E73	1250 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	SPRED1	Q7Z699	444 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CCDC91	Q7Z6B0	441 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CEP97	Q8IW35	865 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	DCUN1D3	Q8IWE4	304 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725		Q8N9G6	341 aa	Predicted RBP	12.82	□□□□□ -0.36
SF1-206	ENST00000413725	PHC3	Q8NDX5	983 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	OR5AR1	Q8NGP9	310 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	OR10G6	Q8NH81	332 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	OR5K2	Q8NHB8	316 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	EEF1AKMT1	Q8WVE0	214 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	MTBP	Q96DY7	904 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	CCDC3	Q9BQI4	270 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	HGH1	Q9BTY7	390 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	DHRS4	Q9BTZ2	278 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	ABCG4	Q9H172	646 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	EPB41L1	Q9H4G0	881 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	KCNK4	Q9NYG8	393 aa		12.82	□□□□□ -0.36
SF1-206	ENST00000413725	COL27A1	Q8IZC6	1860 aa	Predicted RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	DCDC2B	A2VCK2	349 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	PABPN1L	A6NDY0	278 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	GIPC1	O14908	333 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	PHGDH	O43175	533 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	SHBG	P04278	402 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	C8G	P07360	202 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	SNRPA	P09012	282 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	FTH1P19	P0C7X4	201 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	MAP4	P27816	1152 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	ALDH4A1	P30038	563 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	GPLD1	P80108	840 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	ZNF761	Q86XN6	746 aa	Predicted RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	WDR48	Q8TAF3	677 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	PDLIM5	Q96HC4	596 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	AHCYL2	Q96HN2	611 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	ZMYND15	Q9H091	742 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	SYNDIG1	Q9H7V2	258 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	SNX15	Q9NRS6	342 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	ARGLU1	Q9NWB6	273 aa	Predicted RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	TLK1	Q9UKI8	766 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725	RUVBL2	Q9Y230	463 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	TDRKH	Q9Y2W6	561 aa	Known RBP	12.81	□□□□□ -0.36
SF1-206	ENST00000413725	NFS1	Q9Y697	457 aa		12.81	□□□□□ -0.36
SF1-206	ENST00000413725		A0A087X1B8	175 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	PRAMEF33	A0A0G2JMD5	474 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	HMX2	A2RU54	273 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	SMIM23	A6NLE4	172 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TRIM49D1	C9J1S8	452 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	DUX1	O43812	170 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	ZBTB14	O43829	449 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	CDH16	O75309	829 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	PSIP1	O75475	530 aa	Known RBP	12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TCEA3	O75764	348 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	UBXN7	O94888	489 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	RPLP0	P05388	317 aa	Known RBP	12.8	□□□□□ -0.36
SF1-206	ENST00000413725	AMD1	P17707	334 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	GCA	P28676	217 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TYK2	P29597	1187 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	BDKRB1	P46663	353 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	PGGT1B	P53609	377 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	OR1D5	P58170	312 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	PRKG2	Q13237	762 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	SP140	Q13342	867 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	KLHL35	Q6PF15	583 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TMEM207	Q6UWW9	146 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	UBE2R2	Q712K3	238 aa	Predicted RBP	12.8	□□□□□ -0.36
SF1-206	ENST00000413725	CMC1	Q7Z7K0	106 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.8	□□□□□ -0.36
SF1-206	ENST00000413725	TDRP	Q86YL5	185 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	RIBC1	Q8N443	379 aa	Predicted RBP	12.8	□□□□□ -0.36
SF1-206	ENST00000413725	RAB42	Q8N4Z0	105 aa		12.8	□□□□□ -0.36
SF1-206	ENST00000413725	LCN9	Q8WX39	176 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms