RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 GBP6Q6ZN66 633 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 PLEKHM3Q6ZWE6 761 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ARHGAP22Q7Z5H3 698 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 DSG4Q86SJ6 1040 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 TMEM219Q86XT9 240 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 CHCHD4Q8N4Q1 142 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 C10orf53Q8N6V4 93 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ATAD1Q8NBU5 361 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 OCC1Q8TAD7 63 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 SSMEM1Q8WWF3 244 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 PTP4A1Q93096 173 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ST6GALNAC6Q969X2 333 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 CCDC43Q96MW1 224 aaKnown RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 PARK7Q99497 189 aaKnown RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 NEURL2Q9BR09 285 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 MLPHQ9BV36 600 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 UTP14AQ9BVJ6 771 aaKnown RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 Q9N2K0 584 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 TMEM30AQ9NV96 361 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 MALT1Q9UDY8 824 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 VDAC3Q9Y277 283 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 NME7Q9Y5B8 376 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 PCDHAC2Q9Y5I4 1007 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 EVPLQ92817 2033 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 RPGRIP1LQ68CZ1 1315 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZCWPW2A0A1B0GU75 182 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 MED19A0JLT2 244 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 CD8B2A6NJW9 211 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 LDB3O75112 727 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 BAG2O95816 211 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 RLN1P04808 185 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 TFAP2AP05549 437 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 H1F0P07305 194 aaKnown RBP4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 PLA2G4BP0C869 781 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 CKMT2P17540 419 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 CBLP22681 906 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 WNT5AP41221 380 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 LHX1P48742 406 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF81P51508 661 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 PTENP60484 403 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 MRPS21P82921 87 aaKnown RBP4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 UBXN1Q04323 297 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 PRKCZQ05513 592 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 DLG1Q12959 904 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 TAZQ16635 292 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 TYSND1Q2T9J0 566 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 SMU1Q2TAY7 513 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 MDH1BQ5I0G3 518 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 LRRC73Q5JTD7 316 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 GRTP1Q5TC63 336 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 PLXDC2Q6UX71 529 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 GFRALQ6UXV0 394 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 TMEM182Q6ZP80 229 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 LINC00696Q6ZRV3 163 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ASB18Q6ZVZ8 466 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 NUP54Q7Z3B4 507 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 SATL1Q86VE3 508 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 TIGD4Q8IY51 512 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 FBXL14Q8N1E6 418 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 CRYBG2Q8N1P7 616 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ARHGAP24Q8N264 748 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 SPC24Q8NBT2 197 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 RDM1Q8NG50 284 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 DNASE1L2Q92874 299 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF778Q96MU6 729 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 SLX1AQ9BQ83 275 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 BTBD10Q9BSF8 475 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 SEZ6LQ9BYH1 1024 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 CSTL1Q9H114 145 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 SLITRK6Q9H5Y7 841 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 MINDY3Q9H8M7 445 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 DBNDD1Q9H9R9 158 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ACKR4Q9NPB9 350 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ABCB8Q9NUT2 735 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ERAP1Q9NZ08 941 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 ITGA11Q9UKX5 1188 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 CDH7Q9ULB5 785 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 MTUS1Q9ULD2 1270 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 PCDHA7Q9UN72 937 aa4.55□□□□□ -1.68
HMGB3P31-201ENST00000413333 A0A1W2PPW3 197 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 HNRNPCL2B2RXH8 293 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF587BE7ETH6 402 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ST8SIA3O43173 380 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 IGHV2-70P01814 119 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ACAA1P09110 424 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 CSF2RAP15509 400 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF12P17014 697 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 SOAT1P35610 550 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 USP8P40818 1118 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ARCN1P48444 511 aaKnown RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 MMP15P51511 669 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ITGA7Q13683 1181 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 VEZF1Q14119 521 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 SF3B4Q15427 424 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 UGCGQ16739 394 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 LBHQ53QV2 105 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 GLRA4Q5JXX5 417 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 FAM171BQ6P995 826 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 SFR1Q86XK3 245 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms