RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GNB5O14775 395 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 MSL3P1P0C860 447 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 GNAZP19086 355 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 BMP8BP34820 402 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 FRG1Q14331 258 aaKnown RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 TRIP10Q15642 601 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CRTC1Q6UUV9 634 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 TRIM69Q86WT6 500 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SYT12Q8IV01 421 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 OR2T34Q8NGX1 318 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 TMEM237Q96Q45 408 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 TMEM216Q9P0N5 145 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 PRKAG3Q9UGI9 489 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 NDOR1Q9UHB4 597 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SLC12A4Q9UP95 1085 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 LAMA3Q16787 3333 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CLDN9O95484 217 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 OLFM2O95897 454 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 MNX1P50219 401 aaPredicted RBP8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SLC34A1Q06495 639 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 AP5B1Q2VPB7 878 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 Q6ZNB5 142 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 CUZD1Q86UP6 607 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 GPR135Q8IZ08 494 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 UNC5BQ8IZJ1 945 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 ATP6V1C2Q8NEY4 427 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 BBS1Q8NFJ9 593 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 DTX3LQ8TDB6 740 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 EME1Q96AY2 570 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 OR2M4Q96R27 311 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 SRMSQ9H3Y6 488 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 PREBQ9HCU5 417 aa8.37□□□□□ -1.07
SYNE1-211ENST00000413186 A0A1W2PRG6 482 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 IGLON5A6NGN9 336 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 OR5K4A6NMS3 321 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 NPHS1O60500 1241 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 KERAO60938 352 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 MTX2O75431 263 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 E2F6O75461 281 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ASGR2P07307 311 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 PRIM2P49643 509 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 CDH13P55290 713 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 NET1Q7Z628 596 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 CLDN19Q8N6F1 224 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ZSWIM3Q96MP5 696 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ACAT2Q9BWD1 397 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 DERL2Q9GZP9 239 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 LRMDAQ9H2I8 198 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 SH3BP4Q9P0V3 963 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 PSMD13Q9UNM6 376 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 DHRS7Q9Y394 339 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 SRFP11831 508 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 S100A1P23297 94 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ACRV1P26436 265 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 CPA2P48052 419 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 SOX9P48436 509 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 IRX1P78414 480 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 BNIP1Q12981 228 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 RABEPKQ7Z6M1 372 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 IGDCC3Q8IVU1 814 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 TFGQ92734 400 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 THUMPD3Q9BV44 507 aaKnown RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 IPPKQ9H8X2 491 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 KCNK12Q9HB15 430 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 PRR5-ARHGAP8B1AHC4 643 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 EIF3FO00303 357 aaPredicted RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 FFAR2O15552 330 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 RGS10O43665 173 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 HNRNPLP14866 589 aaKnown RBP eCLIP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ITPKAP23677 461 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 S100A3P33764 101 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 CCR2P41597 374 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 DPP6P42658 865 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 PGFP49763 221 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 CLCNKAP51800 687 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 CLCQ05315 142 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 FASTKQ14296 549 aaKnown RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 NEK5Q6P3R8 708 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 UBALD2Q8IYN6 164 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 SYNPOQ8N3V7 929 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 FAM46DQ8NEK8 389 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ATG10Q9H0Y0 220 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 RNPEPL1Q9HAU8 725 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ENTPD4Q9Y227 616 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 MRPS33Q9Y291 106 aaKnown RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 KLHL20Q9Y2M5 609 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 BRCA2P51587 3418 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 K7EPI3 171 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 NR5A2O00482 541 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 FFAR3O14843 346 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 AREL1O15033 823 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 AXIN1O15169 862 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 GPR42O15529 346 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 LINC01565O15544 149 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 BPIP17213 487 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 HNRNPA2B1P22626 353 aaKnown RBP8.36□□□□□ -1.07
SYNE1-211ENST00000413186 HSPA7P48741 367 aa8.36□□□□□ -1.07
SYNE1-211ENST00000413186 ALDH9A1P49189 494 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms