RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 AOC2O75106 756 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 GJA1P17302 382 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 HNF1BP35680 557 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 NAA20P61599 178 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 BOP1Q14137 746 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 RETSATQ6NUM9 610 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 PIH1D2Q8WWB5 315 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 FAM120BQ96EK7 910 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 CIDEBQ9UHD4 219 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 MAN1A2O60476 641 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 ZNF182P17025 639 aaPredicted RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 BPIP17213 487 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 BFSP2Q13515 415 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 GTF2H3Q13889 308 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 GPNMBQ14956 572 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 SNX20Q7Z614 316 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 ZNF461Q8TAF7 563 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 SLC47A1Q96FL8 570 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 KLF16Q9BXK1 252 aaPredicted RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 UGT2B28Q9BY64 529 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 MRPL9Q9BYD2 267 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 MAGEE1Q9HCI5 957 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
NUB1-201ENST00000413040 TDRKHQ9Y2W6 561 aaKnown RBP13.55□□□□□ -0.24
NUB1-201ENST00000413040 H7C0S8 307 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 K7EPI3 171 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 MTX2O75431 263 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 STK16O75716 305 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 GGT1P19440 569 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 RPIAP49247 311 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 SPIDRQ14159 915 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 MEP1AQ16819 746 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 SLC8B1Q6J4K2 584 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 KLHL35Q6PF15 583 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 SUSD1Q6UWL2 747 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 GTF2H4Q92759 462 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 C2orf49Q9BVC5 232 aaPredicted RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 CD244Q9BZW8 370 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 CLEC4EQ9ULY5 219 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 MKI67P46013 3256 aaKnown RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 A0A1W2PQ67 120 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 H3BMQ9 156 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 CXCR6O00574 342 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 EFNA1P20827 205 aaPredicted RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 STK19P49842 368 aaPredicted RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 ALDH3A2P51648 485 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 NKX3-2P78367 333 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 CYP4F8P98187 520 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 NKG7Q16617 165 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 ANKDD1AQ495B1 522 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 C8orf59Q8N0T1 100 aaPredicted RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 DPP10Q8N608 796 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 BPIFB1Q8TDL5 484 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 COG8Q96MW5 612 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 OSBPL6Q9BZF3 934 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 ELOVL6Q9H5J4 265 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 TUBA8Q9NY65 449 aaPredicted RBP13.54□□□□□ -0.24
NUB1-201ENST00000413040 PLXNA3P51805 1871 aa13.54□□□□□ -0.24
NUB1-201ENST00000413040 ZNF682O95780 498 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 CD247P20963 164 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 POLR2IP36954 125 aaKnown RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.243e-8■■■■■ 28.3
NUB1-201ENST00000413040 DRAXINQ8NBI3 349 aaPredicted RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 HJURPQ8NCD3 748 aaPredicted RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 ZNF555Q8NEP9 628 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 RHBDF1Q96CC6 855 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ITCHQ96J02 903 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ATG10Q9H0Y0 220 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 HIPK3Q9H422 1215 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 SRRDQ9UH36 339 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 MYO1GB0I1T2 1018 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ANKRD28O15084 1053 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 TULP3O75386 442 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 TRBC1P01850 177 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 INHAP05111 366 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ANXA5P08758 320 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 S100A3P33764 101 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 TM4SF4P48230 202 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ZXDBP98169 803 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 FOXD4Q12950 439 aaPredicted RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 TTLL9Q3SXZ7 439 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 R3HCC1LQ7Z5L2 792 aaKnown RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 GALNT5Q7Z7M9 940 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 GALNT10Q86SR1 603 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 PARP8Q8N3A8 854 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 PAPD5Q8NDF8 572 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms