RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 AP2M1Q96CW1 435 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 ZG16BQ96DA0 208 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 VCPIP1Q96JH7 1222 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 MUS81Q96NY9 551 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 CRAMP1Q96RY5 1269 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SMC6Q96SB8 1091 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 FEVQ99581 238 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 QTRT1Q9BXR0 403 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 TEX13AQ9BXU3 409 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 LSG1Q9H089 658 aaKnown RBP4.4□□□□□ -1.71
BRCA1-204ENST00000412061 S1PR5Q9H228 398 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 RIBC2Q9H4K1 309 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 CD93Q9NPY3 652 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM184CQ9NVA4 438 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 COX16Q9P0S2 106 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 OR14J1Q9UGF5 321 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 KCNK6Q9Y257 313 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 RAP2CQ9Y3L5 183 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 SNX9Q9Y5X1 595 aa4.4□□□□□ -1.71
BRCA1-204ENST00000412061 KANSL1LA0AUZ9 987 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 MAGEA13PA6NCF6 341 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM8BA6NDV4 472 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM202A6NGA9 273 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ARHGAP42A6NI28 874 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 E5RJQ4 531 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CTDSPLO15194 276 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PLPP2O43688 288 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 HSF2BPO75031 334 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ADCY5O95622 1261 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TOP3BO95985 862 aaKnown RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 AK1P00568 194 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PLA2G4BP0C869 781 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CASQ1P31415 396 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 HMGA2P52926 109 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ZKSCAN8Q15776 578 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PLEKHO1Q53GL0 409 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 FASTKD1Q53R41 847 aaKnown RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SPOUT1Q5T280 376 aaKnown RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 RIPPLY2Q5TAB7 128 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SIGIRRQ6IA17 410 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 FIGLAQ6QHK4 219 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CCBE1Q6UXH8 406 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 WDR88Q6ZMY6 472 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TRILQ7L0X0 811 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ADAMTSL2Q86TH1 951 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SYVN1Q86TM6 617 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 EXOC3L1Q86VI1 746 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SIAH3Q8IW03 269 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CFAP206Q8IYR0 622 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PM20D2Q8IYS1 436 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 LRRC57Q8N9N7 239 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 RNF139Q8WU17 664 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ATL1Q8WXF7 558 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SLAMF9Q96A28 289 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TUBGCP3Q96CW5 907 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ERLEC1Q96DZ1 483 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SPDL1Q96EA4 605 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 DTD2Q96FN9 168 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 ZNF333Q96JL9 665 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PANX3Q96QZ0 392 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 SEPHS2Q99611 448 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CPNE1Q99829 537 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TMEM79Q9BSE2 394 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PRSS22Q9GZN4 317 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CDT1Q9H211 546 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 GPN1Q9HCN4 374 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-204ENST00000412061 CENPMQ9NSP4 180 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 PNPLA3Q9NST1 481 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 TRIM10Q9UDY6 481 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 MAD2L2Q9UI95 211 aa4.39□□□□□ -1.71
BRCA1-204ENST00000412061 KCNU1A8MYU2 1149 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 SGK1O00141 431 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 TLR4O00206 839 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PTGESO14684 152 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 MAP2K7O14733 419 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 MEIS2O14770 477 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 ANGPT2O15123 496 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 AP5Z1O43299 807 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PPIP5K2O43314 1243 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 TLX3O43711 291 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 GMFGO60234 142 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 FCGR3BO75015 233 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 CNOT3O75175 753 aaKnown RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 RGS11O94810 467 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 GLCEO94923 617 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 PRAMEF12O95522 483 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 ACSL3O95573 720 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 MMP3P08254 477 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 DANCRP0C864 163 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 G6PDP11413 515 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 DDX5P17844 614 aaKnown RBP4.38□□□□□ -1.71
BRCA1-204ENST00000412061 NR1D1P20393 614 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 DNAJB1P25685 340 aa4.38□□□□□ -1.71
BRCA1-204ENST00000412061 HOXC9P31274 260 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms