RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.77□□□□□ -1.33
LSM8-202ENST00000411938 PCDHGB6Q9Y5F9 930 aa6.77□□□□□ -1.33
LSM8-202ENST00000411938 PCYT1BQ9Y5K3 369 aaPredicted RBP6.77□□□□□ -1.33
LSM8-202ENST00000411938 CSAG2Q9Y5P2 127 aa6.77□□□□□ -1.33
LSM8-202ENST00000411938 SCINQ9Y6U3 715 aa6.77□□□□□ -1.33
LSM8-202ENST00000411938 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.33
LSM8-202ENST00000411938 TLDC2A0PJX2 215 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 NPIPB15A6NHN6 443 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 PDZK1P1A8MUH7 402 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 WASH4PA8MWX3 477 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PSMD11O00231 422 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PEX12O00623 359 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CREB3O43889 395 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 DNAJC6O75061 913 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SOD1P00441 154 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 ABHD2P08910 425 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 XRCC1P18887 633 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 SDC4P31431 198 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SLC19A1P41440 591 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 TSFMP43897 325 aaKnown RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 GABRB2P47870 512 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SCTRP47872 440 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 GTF2A1P52655 376 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 AP1S1P61966 158 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PPP1CAP62136 330 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PTPRRQ15256 657 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 GPR19Q15760 415 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 C15orf59Q2T9L4 293 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 DCAF10Q5QP82 559 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PLEKHS1Q5SXH7 462 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 DUS1LQ6P1R4 473 aaKnown RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 MTFR2Q6P444 385 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 XKRXQ6PP77 449 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 ZNF765Q7L2R6 523 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 TECPR1Q7Z6L1 1165 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 MRGPREQ86SM8 312 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 TSPAN33Q86UF1 283 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CCDC25Q86WR0 208 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CCDC50Q8IVM0 306 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 KATNAL2Q8IYT4 538 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 LRRC34Q8IZ02 419 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 UMODL1-AS1Q8N2C9 162 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PYROXD2Q8N2H3 581 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 RIBC1Q8N443 379 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 CCDC185Q8N715 623 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 EXD1Q8NHP7 514 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 DNAJB14Q8TBM8 379 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 C1orf54Q8WWF1 131 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CPT1BQ92523 772 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CCT6BQ92526 530 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CLIP3Q96DZ5 547 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 CELF6Q96J87 481 aaKnown RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 CNDP1Q96KN2 507 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SERPINB12Q96P63 405 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 AGAP2Q99490 1192 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SLX1AQ9BQ83 275 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 C11orf70Q9BRQ4 267 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 GSX1Q9H4S2 264 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 SCHIP1Q9P0W5 487 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 EPHA6Q9UF33 1036 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 LGALS13Q9UHV8 139 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 SH3BGRL2Q9UJC5 107 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 PCDHGC4Q9Y5F7 938 aa6.76□□□□□ -1.33
LSM8-202ENST00000411938 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
LSM8-202ENST00000411938 A0A0U1RQS6 177 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 A0A1W2PQ67 120 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 TTC24A2A3L6 582 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 FAM221AA4D161 298 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 CCT8L1PA6NM43 557 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 C9J4A7 227 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 C19orf84I3L1E1 186 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 MASP2O00187 686 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 NDC80O14777 642 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 LDB2O43679 373 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 ACSL3O95573 720 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 JCHAINP01591 159 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 IGHEP01854 428 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PYGLP06737 847 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 CTPS1P17812 591 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 KLK2P20151 261 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PTPN7P35236 360 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 KIR3DL1P43629 444 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 SLCO1A2P46721 670 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 KCNJ1P48048 391 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 ITGA8P53708 1063 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 IFI35P80217 286 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 HSD11B2P80365 405 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 OTUD4Q01804 1114 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 SRSF11Q05519 484 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 NSUN2Q08J23 767 aaKnown RBP eCLIP6.75□□□□□ -1.33
LSM8-202ENST00000411938 KLF1Q13351 362 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 XRCC4Q13426 336 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 GPR18Q14330 331 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 ZNF169Q14929 603 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 NCF4Q15080 339 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 SNCBQ16143 134 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 SEPT7Q16181 437 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 LONRF1Q17RB8 773 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms