RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CCDC8Q9H0W5 538 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SRD5A3Q9H8P0 318 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 PLEKHA5Q9HAU0 1116 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 XPNPEP3Q9NQH7 507 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SIRT7Q9NRC8 400 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 CFAP97Q9P2B7 532 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 FRMD4AQ9P2Q2 1039 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 LEF1Q9UJU2 399 aaPredicted RBP-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 SERTAD3Q9UJW9 196 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMX2Q9Y320 296 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RAI2Q9Y5P3 530 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 ACTL7AQ9Y615 435 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 STYXL1Q9Y6J8 313 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 WDR90Q96KV7 1748 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 WDFY4Q6ZS81 3184 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 DOCK9Q9BZ29 2069 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 NEDD4P46934 1319 aa-1.67□□□□□ -2.68
RNU4-88P-201ENST00000411220 RFX7Q2KHR2 1363 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ST20-MTHFSA0A0A6YYL1 179 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 CCDC189A1A4V9 331 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 WASHC1A8K0Z3 465 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 WASH3PC4AMC7 463 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 M0R2T5 61 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 WNT9BO14905 357 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF263O14978 683 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SMAD9O15198 467 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RRP8O43159 456 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC19A2O60779 497 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 TBL1XO60907 577 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPC4O75487 556 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SOX30O94993 753 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 CSPG5O95196 566 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 CYP17A1P05093 508 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 PFKMP08237 780 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZSCAN5DPP0CG00 497 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 EDN2P20800 178 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 BCKDHBP21953 392 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 NPY1RP25929 384 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC6A4P31645 630 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 GGT5P36269 586 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 AGFG1P52594 562 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 KLF3P57682 345 aaPredicted RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SUMO2P61956 95 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RPS11P62280 158 aaKnown RBP eCLIP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 KLHL30Q0D2K2 578 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 FCHO2Q0JRZ9 810 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 TPBGQ13641 420 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RUNX2Q13950 521 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 VGLL4Q14135 290 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 LY6DQ14210 128 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF266Q14584 549 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ATXN7L3Q14CW9 347 aaPredicted RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SGCBQ16585 318 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 COX19Q49B96 90 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 MTFR2Q6P444 385 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 GLIPR1L1Q6UWM5 242 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 WASH2PQ6VEQ5 465 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMPPEQ6ZT21 453 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 MIGA2Q7L4E1 593 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 KCTD20Q7Z5Y7 419 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 TFAP2DQ7Z6R9 452 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPAT4Q86UL3 456 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 METTL16Q86W50 562 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SKAP1Q86WV1 359 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 UBQLNLQ8IYU4 475 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 STPG4Q8N801 248 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RTL3Q8N8U3 475 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZIC4Q8N9L1 334 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 Q8NAQ8 132 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 Q8NBF4 154 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 CSNK1G2-AS1Q8NCQ2 148 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZSWIM2Q8NEG5 633 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SPPL2AQ8TCT8 520 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RNASE8Q8TDE3 154 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 KBTBD7Q8WVZ9 684 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RAB40AQ8WXH6 277 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RHBDF1Q96CC6 855 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC35A4Q96G79 324 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 LRFN5Q96NI6 719 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 CDCA3Q99618 268 aaPredicted RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 NT5C1AQ9BXI3 368 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 CHRNA10Q9GZZ6 450 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZMYND12Q9H0C1 365 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 XRN2Q9H0D6 950 aaKnown RBP eCLIP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 PARP12Q9H0J9 701 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 NANOGQ9H9S0 305 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 TBC1D17Q9HA65 648 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SNX15Q9NRS6 342 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 SERINC1Q9NRX5 453 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMEM140Q9NV12 185 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 FBXO40Q9UH90 709 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 RUVBL1Q9Y265 456 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF510Q9Y2H8 683 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 POMT1Q9Y6A1 747 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 YEATS2Q9ULM3 1422 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 MAP2P11137 1827 aaKnown RBP-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 DNAJC13O75165 2243 aa-1.68□□□□□ -2.68
RNU4-88P-201ENST00000411220 LRRK1Q38SD2 2015 aa-1.69□□□□□ -2.68
RNU4-88P-201ENST00000411220 ATG2BQ96BY7 2078 aa-1.69□□□□□ -2.68
RNU4-88P-201ENST00000411220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms