RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SP140Q13342 867 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 CCSMST1Q4G0I0 132 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 RASGRP3Q8IV61 690 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 CFAP206Q8IYR0 622 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 CPSF7Q8N684 471 aaKnown RBP17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 TP53I13Q8NBR0 393 aaPredicted RBP17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 ATP6V1E2Q96A05 226 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 EPHX3Q9H6B9 360 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 AKTIPQ9H8T0 292 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 POLG2Q9UHN1 485 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 OR1A2Q9Y585 309 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 ANGPTL3Q9Y5C1 460 aa17.17■□□□□ 0.34
LRPPRC-203ENST00000409946 K7EPI3 171 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 RNGTTO60942 597 aaKnown RBP17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 HIST1H2AGP0C0S8 130 aaPredicted RBP17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 UROSP10746 265 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 COX4I1P13073 169 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 HIST1H2ADP20671 130 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 CYP2A7P20853 494 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 MAT2AP31153 395 aaKnown RBP17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 PGM1P36871 562 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 RGS19P49795 217 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 PKNOX1P55347 436 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 MRPS21P82921 87 aaKnown RBP17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 MXRA7P84157 204 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 GRB7Q14451 532 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 INPP5AQ14642 412 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 CHSY3Q70JA7 882 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 SLC22A15Q8IZD6 547 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 KCNV2Q8TDN2 545 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 FAM3CQ92520 227 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 FAM131CQ96AQ9 280 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 PYCR2Q96C36 320 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 SIPA1Q96FS4 1042 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 HIST1H2AHQ96KK5 128 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 HIST1H2AJQ99878 128 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 MYOCQ99972 504 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 H2AFJQ9BTM1 129 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 TRIM54Q9BYV2 358 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 FZD3Q9NPG1 666 aa17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 NDRG2Q9UN36 371 aaKnown RBP17.16■□□□□ 0.34
LRPPRC-203ENST00000409946 UBDO15205 165 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 SLC16A5O15375 505 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 VEGFDO43915 354 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 PSIP1O75475 530 aaKnown RBP17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 STK16O75716 305 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 POP7O75817 140 aaKnown RBP17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 CAPN1P07384 714 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 ALDOCP09972 364 aaKnown RBP17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 PIK3CGP48736 1102 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 PPP2CBP62714 309 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 PPP2CAP67775 309 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 CDKL1Q00532 357 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 NFE2L1Q14494 772 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 SLC44A4Q53GD3 710 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 TMEM31Q5JXX7 168 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 KIAA1324Q6UXG2 1013 aaKnown RBP17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 TRMT11Q7Z4G4 463 aaKnown RBP17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 C11orf96Q7Z7L8 435 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 SNX32Q86XE0 403 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.15■□□□□ 0.345e-6■■■■■ 55.7
LRPPRC-203ENST00000409946 OR2T11Q8NH01 316 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 HMGCLL1Q8TB92 370 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 HBEGFQ99075 208 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 NUSAP1Q9BXS6 441 aaKnown RBP17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 ATG10Q9H0Y0 220 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 LRRC42Q9Y546 428 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 ST14Q9Y5Y6 855 aa17.15■□□□□ 0.34
LRPPRC-203ENST00000409946 H3BM21 787 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 EPORP19235 508 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 RPS21P63220 83 aaKnown RBP17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 SLC25A3Q00325 362 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 CCINQ13939 588 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 TMEM259Q4ZIN3 620 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 FAM83HQ6ZRV2 1179 aaPredicted RBP17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 MCOLN3Q8TDD5 553 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 TUBGCP3Q96CW5 907 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 MRGPRX1Q96LB2 322 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 FBRSQ9HAH7 460 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 TM7SF3Q9NS93 570 aa17.14■□□□□ 0.34
LRPPRC-203ENST00000409946 TBC1D3DA0A087WVF3 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3IA0A087WXS9 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3EA0A087X179 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3KA0A087X1G2 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 PABPN1LA6NDY0 278 aaKnown RBP17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3FA6NER0 549 aaPredicted RBP17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3LB9A6J9 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 WDR47O94967 919 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 OTCP00480 354 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3HP0C7X1 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 NDUFV2P19404 249 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 CUL3Q13618 768 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 AGERQ15109 404 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 PTCHD3Q3KNS1 767 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3GQ6DHY5 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 TBC1D3CQ6IPX1 549 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 Q6ZS52 159 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 GK5Q6ZS86 529 aa17.14■□□□□ 0.33
LRPPRC-203ENST00000409946 MILR1Q7Z6M3 343 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms