RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 JRKLQ9Y4A0 524 aa14.12□□□□□ -0.15
NIF3L1-205ENST00000409588 TCAF1Q9Y4C2 921 aa14.12□□□□□ -0.15
NIF3L1-205ENST00000409588 MRFAP1Q9Y605 127 aa14.12□□□□□ -0.15
NIF3L1-205ENST00000409588 SLC5A10A0PJK1 596 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 TERTO14746 1132 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 NKX2-8O15522 239 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 CPNE3O75131 537 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 GOT2P00505 430 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 HBQ1P09105 142 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 FAM87AP0C7U9 286 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 ZNF28P17035 718 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 ACADLP28330 430 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PDHA2P29803 388 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 KPNA2P52292 529 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PPP1CAP62136 330 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 RPS15P62841 145 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 DNAJC21Q5F1R6 531 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PWWP2BQ6NUJ5 590 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 HOOK3Q86VS8 718 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 UNC5BQ8IZJ1 945 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 TAB3Q8N5C8 712 aaPredicted RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 LILRA3Q8N6C8 439 aaPredicted RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 OR52E1Q8NGJ3 308 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 OR5K2Q8NHB8 316 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 CPT1BQ92523 772 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 ZNF501Q96CX3 271 aaPredicted RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 ELMO2Q96JJ3 720 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PBKQ96KB5 322 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 DPH2Q9BQC3 489 aaPredicted RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 HELZ2Q9BYK8 2649 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PITPNM3Q9BZ71 974 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PIH1D1Q9NWS0 290 aaKnown RBP14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 IL17BQ9UHF5 180 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 CROTQ9UKG9 612 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 ASF1AQ9Y294 204 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 PPP2R2CQ9Y2T4 447 aa14.11□□□□□ -0.15
NIF3L1-205ENST00000409588 MAGEB16A2A368 324 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 CCDC78A2IDD5 438 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 GSAPA4D1B5 854 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 CEP104O60308 925 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 CREG1O75629 220 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 SCRG1O75711 98 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 CD63P08962 238 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 EBLN1P0CF75 366 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 ETS1P14921 441 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TPSB2P20231 275 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 GRIA1P42261 906 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 PREPP48147 710 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 POLE2P56282 527 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 KCNAB2Q13303 367 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TPSAB1Q15661 275 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 SYTL3Q4VX76 610 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 DUS1LQ6P1R4 473 aaKnown RBP14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 LRRC8BQ6P9F7 803 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 ZNF517Q6ZMY9 492 aaPredicted RBP14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 SDCCAG8Q86SQ7 713 aaPredicted RBP14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TMEM126BQ8IUX1 230 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 PHC3Q8NDX5 983 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 THAP4Q8WY91 577 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 ZDHHC16Q969W1 377 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 SLC22A18Q96BI1 424 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TCTN2Q96GX1 697 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 PANX3Q96QZ0 392 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TCF12Q99081 682 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 MRM3Q9HC36 420 aaKnown RBP14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 CHRAC1Q9NRG0 131 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 CATSPERZQ9NTU4 200 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 SOHLH2Q9NX45 425 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TTC7AQ9ULT0 858 aaPredicted RBP14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 POLHQ9Y253 713 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 ZNF462Q96JM2 2506 aa14.1□□□□□ -0.15
NIF3L1-205ENST00000409588 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 PIPSLA2A3N6 862 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 SLC9B1P1A6NJY1 282 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 BTN3A3O00478 584 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 PRMT5O14744 637 aaPredicted RBP14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 CD3EAPO15446 510 aaKnown RBP14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 APOA4P06727 396 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 PRSS56P0CW18 603 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 BASP1P80723 227 aaKnown RBP14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 CCZ1BP86790 482 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 CCZ1P86791 482 aaPredicted RBP14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 NFATC3Q12968 1075 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 DNASE1L3Q13609 305 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 KCNAB1Q14722 419 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 IZUMO3Q5VZ72 239 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 TTC23LQ6PF05 361 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 ATG14Q6ZNE5 492 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 SLC22A15Q8IZD6 547 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 ADGRF3Q8IZF5 1079 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 NAT14Q8WUY8 206 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 KIFC1Q9BW19 673 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 TREX1Q9NSU2 369 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 PRSS21Q9Y6M0 314 aa14.09□□□□□ -0.15
NIF3L1-205ENST00000409588 OR51F1A6NGY5 319 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 BTN3A1O00481 513 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 SUV39H1O43463 412 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 KATNA1O75449 491 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 GPC4O75487 556 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 SLCO2B1O94956 709 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms