RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 PRDM8Q9NQV8 689 aa15.29■□□□□ 0.04
SHANK2-204ENST00000409530 THAP1Q9NVV9 213 aa15.29■□□□□ 0.04
SHANK2-204ENST00000409530 DMTF1Q9Y222 760 aa15.29■□□□□ 0.04
SHANK2-204ENST00000409530 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 TRBV23OR9-2A0A075B6M9 112 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 OR52A4PA6NMU1 304 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 C8GP07360 202 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 DHPSP49366 369 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ASPHQ12797 758 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 UNC50Q53HI1 259 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ABI3BPQ7Z7G0 1075 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 C2orf73Q8N5S3 287 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-204ENST00000409530 MED8Q96G25 268 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 KLHDC7BQ96G42 594 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 RMDN2Q96LZ7 410 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 GSTO2Q9H4Y5 243 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 PARVBQ9HBI1 364 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 DNAJC28Q9NX36 388 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 TP53BP1Q12888 1972 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-204ENST00000409530 FAM86C2PA6NEL3 165 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ERICH4A6NGS2 130 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 KLF11O14901 512 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 CATP04040 527 aaKnown RBP15.28■□□□□ 0.04
SHANK2-204ENST00000409530 WNT1P04628 370 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 CELA2BP08218 269 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-204ENST00000409530 IMPDH1P20839 514 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ITPKAP23677 461 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 CD27P26842 260 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ACTR1BP42025 376 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ALDH18A1P54886 795 aaKnown RBP15.28■□□□□ 0.04
SHANK2-204ENST00000409530 ACTR1AP61163 376 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 CTBSQ01459 385 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 C1orf61Q13536 156 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 SETDB1Q15047 1291 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 SH2D4BQ5SQS7 431 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 SPATA21Q7Z572 469 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 C1orf210Q8IVY1 113 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 OXR1Q8N573 874 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 RAB3IL1Q8TBN0 382 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 C12orf66Q96MD2 445 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 CDK15Q96Q40 435 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 TMEM79Q9BSE2 394 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 TRIM54Q9BYV2 358 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 OR52A5Q9H2C5 316 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 TNFRSF12AQ9NP84 129 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 KLHL42Q9P2K6 505 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 HS3ST3A1Q9Y663 406 aa15.28■□□□□ 0.04
SHANK2-204ENST00000409530 PRAMEF33A0A0G2JMD5 474 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 C17orf113A0A1B0GUU1 675 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 IFRD1O00458 451 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-204ENST00000409530 H2AFYO75367 372 aaKnown RBP15.27■□□□□ 0.04
SHANK2-204ENST00000409530 ANXA5P08758 320 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 NFKB2Q00653 900 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 FRMD7Q6ZUT3 714 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 PDZD3Q86UT5 571 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 MYLK4Q86YV6 388 aaPredicted RBP15.27■□□□□ 0.04
SHANK2-204ENST00000409530 LSMEM2Q8N112 164 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 MCOLN3Q8TDD5 553 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 SLC12A9Q9BXP2 914 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 DRC3Q9H069 523 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 TM9SF3Q9HD45 589 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 KLF15Q9UIH9 416 aa15.27■□□□□ 0.04
SHANK2-204ENST00000409530 A0A1B0GTL3 188 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TMEM114B3SHH9 223 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 GPR89AB7ZAQ6 455 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 EIF3FO00303 357 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TAPBPO15533 448 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 SKAP2O75563 359 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 MATN4O95460 622 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 GPR89BP0CG08 455 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TROVE2P10155 538 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■■□□□ 11.8
SHANK2-204ENST00000409530 CD38P28907 300 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 MAGEA9P43362 315 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 CSNK1EP49674 416 aaKnown RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 DNAJB13P59910 316 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 YPEL5P62699 121 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 SP140Q13342 867 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 PDCD2Q16342 344 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 VWA5B1Q5TIE3 1220 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 GKAP1Q5VSY0 366 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 CLEC6AQ6EIG7 209 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 SLC36A4Q6YBV0 504 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 TEX9Q8N6V9 391 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 JPH3Q8WXH2 748 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 RHBDF1Q96CC6 855 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 L3HYPDHQ96EM0 354 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 C7orf26Q96N11 449 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 IL17FQ96PD4 163 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 KCNA7Q96RP8 456 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 IER2Q9BTL4 223 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 PCTPQ9UKL6 214 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 ANGPTL3Q9Y5C1 460 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 UBFD1O14562 309 aaKnown RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 KATNA1O75449 491 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 PSIP1O75475 530 aaKnown RBP15.26■□□□□ 0.03
SHANK2-204ENST00000409530 EML2O95834 649 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 FZD2Q14332 565 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 METRNLQ641Q3 311 aa15.26■□□□□ 0.03
SHANK2-204ENST00000409530 ANKS6Q68DC2 871 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms