RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 OTUB1Q96FW1 271 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ASB2Q96Q27 587 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 BDH2Q9BUT1 245 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 OSBPL6Q9BZF3 934 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ARMC1Q9NVT9 282 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SPATA7Q9P0W8 599 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SARDHQ9UL12 918 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 CCL26Q9Y258 94 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 TRIOO75962 3097 aa13.14□□□□□ -0.31
COL6A2-204ENST00000409416 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 PAPSS2O95340 614 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 PENKP01210 267 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 POU1F1P28069 291 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 HOXC13P31276 330 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 CA5AP35218 305 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 CLCN2P51788 898 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ZBED5Q49AG3 693 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 SPANXN4Q5MJ08 99 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 OGFOD2Q6N063 350 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 RETSATQ6NUM9 610 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 MINDY1Q8N5J2 469 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 LILRA3Q8N6C8 439 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 KIAA1191Q96A73 305 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 EGLN2Q96KS0 407 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TFB2MQ9H5Q4 396 aaKnown RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 MIA3Q5JRA6 1907 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ANTXRLA6NF34 631 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 OR6C75A6NL08 312 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 BOLA2-SMG1P6H3BVE0 249 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ULK1O75385 1050 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 CLDN11O75508 207 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 OPN1SWP03999 348 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 VARSP26640 1264 aaKnown RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 NOGQ13253 232 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ACOX1Q15067 660 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 Q6ZVL8 140 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TRMT11Q7Z4G4 463 aaKnown RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 MRPL10Q7Z7H8 261 aaKnown RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 LIX1Q8N485 282 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TMCO5AQ8N6Q1 288 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 SGCDQ92629 289 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ZUFSPQ96AP4 578 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 OAZ2O95190 189 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 CHRM5P08912 532 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 FCGR1AP12314 374 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 RFC2P35250 354 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 MTHFRP42898 656 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ALDH3B2P48448 385 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 CCT8P50990 548 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 MAPKAPK3Q16644 382 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TRAPPC5Q8IUR0 188 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 C17orf50Q8WW18 174 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 OR52E6Q96RD3 313 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-204ENST00000409416 SLC22A14Q9Y267 594 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 GPR45Q9Y5Y3 372 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
COL6A2-204ENST00000409416 GLYATL1P3A0A0U1RQE8 302 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 EOMESO95936 686 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 POU2F1P14859 743 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 CD247P20963 164 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 IL12AP29459 219 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 ERVPABLB-1P60509 514 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 ARF5P84085 180 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 TIAL1Q01085 375 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 CTBSQ01459 385 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 GTF2H2Q13888 395 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 CARTPTQ16568 116 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 C6orf136Q5SQH8 315 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 GTF2H2CQ6P1K8 395 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 PATL1Q86TB9 770 aaKnown RBP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 OSCP1Q8WVF1 389 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 SH3KBP1Q96B97 665 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 GPATCH1Q9BRR8 931 aaKnown RBP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 NPLQ9BXD5 320 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 RIBC2Q9H4K1 309 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 UTS2RQ9UKP6 389 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 PADI4Q9UM07 663 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
COL6A2-204ENST00000409416 LOC285095A0A1B0GVY8 99 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 LATO43561 262 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 NDUFB5O43674 189 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 CYP11A1P05108 521 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 GPIP06744 558 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 HSD17B1P14061 328 aa13.12□□□□□ -0.31
COL6A2-204ENST00000409416 TTPAP49638 278 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms