RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 WASF2Q9Y6W5 498 aa12.68□□□□□ -0.38
SMARCB1-203ENST00000407082 URB1O60287 2271 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 WDFY3Q8IZQ1 3526 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 TCRBV21S2A2A0A5A6 115 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 UBXN8O00124 270 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 CCL22O00626 93 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 PRMT5O14744 637 aaPredicted RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 BUD23O43709 281 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 KLK8O60259 260 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 SNAP91O60641 907 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 MATN4O95460 622 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ASLP04424 464 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 PIRTP0C851 137 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 CHRM3P20309 590 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ITGALP20701 1170 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 NFKBIAP25963 317 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 HMGCLP35914 325 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ABL2P42684 1182 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 MRPS21P82921 87 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 FOXM1Q08050 763 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 MED21Q13503 144 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 SEMA3AQ14563 771 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 KIF19Q2TAC6 998 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 GPR33Q49SQ1 333 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 TCHHL1Q5QJ38 904 aaPredicted RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 KANK2Q63ZY3 851 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 TTC23LQ6PF05 361 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 IZUMO2Q6UXV1 221 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ADAMTSL2Q86TH1 951 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 PIM3Q86V86 326 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 CBARPQ8N350 705 aaPredicted RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 TTC30BQ8N4P2 665 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ADCY4Q8NFM4 1077 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 TWIST2Q8WVJ9 160 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 PYDC1Q8WXC3 89 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ADAMTS14Q8WXS8 1223 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 EXT2Q93063 718 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ASB9Q96DX5 294 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 MYO19Q96H55 970 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 GPR21Q99679 349 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 UNKQ9C0B0 810 aaKnown RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 CLPBQ9H078 707 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 MUC13Q9H3R2 512 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ATP13A3Q9H7F0 1226 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 SPAG4Q9NPE6 437 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ADA2Q9NZK5 511 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 IL17CQ9P0M4 197 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 THAP10Q9P2Z0 257 aaPredicted RBP12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 LHX3Q9UBR4 397 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 HCN2Q9UL51 889 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 PPM1HQ9ULR3 514 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 DHRS7Q9Y394 339 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 ZNF711Q9Y462 761 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 APC2O95996 2303 aa12.67□□□□□ -0.38
SMARCB1-203ENST00000407082 IFRD1O00458 451 aaPredicted RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 MRASO14807 208 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 NPC1O15118 1278 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 FZD6O60353 706 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 SMNDC1O75940 238 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 CDK14O94921 469 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 PGLSO95336 258 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 SRPRAP08240 638 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 SYPP08247 313 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 DGKAP23743 735 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 EEF1DP29692 281 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 NTSR1P30989 418 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 NNMTP40261 264 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 RGRP47804 291 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 PGGT1BP53609 377 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 ST8SIA6P61647 398 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 TRAF2Q12933 501 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 ZNF234Q14588 700 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 OR4D1Q15615 310 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 TMEM198Q66K66 360 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 REP15Q6BDI9 236 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 OGFOD2Q6N063 350 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 LINGO4Q6UY18 593 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 FRA10AC1Q70Z53 315 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 PDSS2Q86YH6 399 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 DDIASQ8IXT1 998 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 RBFAQ8N0V3 343 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 PQLC1Q8N2U9 271 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 IL17RCQ8NAC3 791 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 GOLM1Q8NBJ4 401 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 FAM136AQ96C01 138 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 MIEF2Q96C03 454 aa12.66□□□□□ -0.38
SMARCB1-203ENST00000407082 ERLEC1Q96DZ1 483 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms