RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SNX20Q7Z614 316 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 SERPINA9Q86WD7 417 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 HIPK1Q86Z02 1210 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 MSRB3Q8IXL7 192 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 LIX1Q8N485 282 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 FAM86B1Q8N7N1 296 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 BPIFB6Q8NFQ5 453 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 CCDC138Q96M89 665 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 AMBRA1Q9C0C7 1298 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 KAT8Q9H7Z6 458 aaKnown RBP10.52□□□□□ -0.72
CLIP4-204ENST00000404424 SMURF2Q9HAU4 748 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 LRTM1Q9HBL6 345 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 ELOVL2Q9NXB9 296 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 WWOXQ9NZC7 414 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 SNX5Q9Y5X3 404 aa10.52□□□□□ -0.72
CLIP4-204ENST00000404424 LOC100130705A0A1B0GUX0 176 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 CREG1O75629 220 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 PRKD3O94806 890 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 CCDC159P0C7I6 412 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 ITIH1P19827 911 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 PIK3CGP48736 1102 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 PLA2G16P53816 162 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 RAD23AP54725 363 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 RHOAP61586 193 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 KCNAB2Q13303 367 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 PON2Q15165 354 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 SPANXN4Q5MJ08 99 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 TTC23LQ6PF05 361 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 DCDC5Q6ZRR9 648 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 C16orf59Q7L2K0 433 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 FAM9CQ8IZT9 166 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 ZCCHC7Q8N3Z6 543 aaKnown RBP10.52□□□□□ -0.73
CLIP4-204ENST00000404424 NUDT8Q8WV74 236 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 SNRNP27Q8WVK2 155 aaKnown RBP10.52□□□□□ -0.73
CLIP4-204ENST00000404424 USP7Q93009 1102 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 RHBDF1Q96CC6 855 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 EID2BQ96D98 161 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 TTPALQ9BTX7 342 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 SLC29A3Q9BZD2 475 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 RAD21L1Q9H4I0 556 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 SLC25A37Q9NYZ2 338 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 KLQ9UEF7 1012 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 ZNF490Q9ULM2 529 aaPredicted RBP10.52□□□□□ -0.73
CLIP4-204ENST00000404424 SH3GLB1Q9Y371 365 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 NAALAD2Q9Y3Q0 740 aa10.52□□□□□ -0.73
CLIP4-204ENST00000404424 TRBV5-3A0A0A0MS03 114 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 SOBPA7XYQ1 873 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 SLC16A6O15403 523 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 GPR39O43194 453 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 NOBOXO60393 691 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 SEC22BO75396 215 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 RECQL5O94762 991 aaPredicted RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 SLC25A14O95258 325 aaPredicted RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PRAMEF1O95521 474 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 EPB42P16452 691 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 IL7RP16871 459 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ITGALP20701 1170 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CCND3P30281 292 aaPredicted RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 SLC11A1P49279 550 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ISL1P61371 349 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 AP1S1P61966 158 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 BFSP2Q13515 415 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PTPRRQ15256 657 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 MEP1AQ16819 746 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 USP39Q53GS9 565 aaKnown RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 LRIF1Q5T3J3 769 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ZNF691Q5VV52 312 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 SPESP1Q6UW49 350 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 LINGO4Q6UY18 593 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CALHM3Q86XJ0 350 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PLPP6Q8IY26 295 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CHPT1Q8WUD6 406 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 MUL1Q969V5 352 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ZNF566Q969W8 418 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 FKBP10Q96AY3 582 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 TBC1D20Q96BZ9 403 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ULK4Q96C45 1275 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CASD1Q96PB1 797 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 OR52E6Q96RD3 313 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 BCL7BQ9BQE9 202 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 KCNH6Q9H252 994 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 IKZF5Q9H5V7 419 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ASB8Q9H765 288 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 C1orf109Q9NX04 203 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 MAN2B2Q9Y2E5 1009 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PCDHB7Q9Y5E2 793 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 ORC6Q9Y5N6 252 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 TRBV5-4A0A0C4DH59 114 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CFAP99D6REC4 459 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 MANBAO00462 879 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 TSPAN3O60637 253 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PGLSO95336 258 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 OCM2P0CE71 109 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 OCMP0CE72 109 aaPredicted RBP10.51□□□□□ -0.73
CLIP4-204ENST00000404424 PIGAP37287 484 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 DCTP40126 519 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CD97P48960 835 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 IST1P53990 364 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 CD47Q08722 323 aa10.51□□□□□ -0.73
CLIP4-204ENST00000404424 NFATC2Q13469 925 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms