RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 TNFRSF11BO00300 401 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 RHOQP17081 205 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 MYL12AP19105 171 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 HTR1BP28222 390 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 TALDO1P37837 337 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 ITGA1P56199 1179 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.217e-7■■■■□ 22.5
HMGA2-204ENST00000403681 SPANXN4Q5MJ08 99 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 AGAP7PQ5VUJ5 663 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 CHDHQ8NE62 594 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PHF10Q8WUB8 498 aaKnown RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 L3HYPDHQ96EM0 354 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 TRIM45Q9H8W5 580 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 SNX7Q9UNH6 387 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PRMT5O14744 637 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 NIPSNAP2O75323 286 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 TUBA3EQ6PEY2 450 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 DSG4Q86SJ6 1040 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 TSGA13Q96PP4 275 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 ASB8Q9H765 288 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 MARCH4Q9P2E8 410 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 TESMINQ9Y4I5 508 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 SPEF1Q9Y4P9 236 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 PIPSLA2A3N6 862 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 SNTNA6NMZ2 147 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 SEC14L2O76054 403 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 S1PR4O95977 384 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 GNG2P59768 71 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 MXD1Q05195 221 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 HIST2H2ACQ16777 129 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 CES5AQ6NT32 575 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 TLK2Q86UE8 772 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 FUNDC1Q8IVP5 155 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 LPPQ93052 612 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 CDKN2AIPNLQ96HQ2 116 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 ABCB9Q9NP78 766 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 ADAM30Q9UKF2 790 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 GSTK1Q9Y2Q3 226 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 AHDC1Q5TGY3 1603 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 PRR23D1E9PI22 279 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 IRAK2O43187 625 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 PGRP06401 933 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 PRR23D2P0DMB1 279 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 CD40LGP29965 261 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 SYTL3Q4VX76 610 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 UBE2UQ5VVX9 321 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 ERICH5Q6P6B1 374 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 SCAMP5Q8TAC9 235 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■■□□ 15.7
HMGA2-204ENST00000403681 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 H2AFY2Q9P0M6 372 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-204ENST00000403681 COL1A2P08123 1366 aa13.71□□□□□ -0.21
HMGA2-204ENST00000403681 SYNDIG1LA6NDD5 238 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 J3KR12 359 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 PER2O15055 1255 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 FGF4P08620 206 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 IDUAP35475 653 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 PBX3P40426 434 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 BRCC3P46736 316 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 CD83Q01151 205 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 IRF8Q02556 426 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 OXA1LQ15070 435 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 SYVN1Q86TM6 617 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 PPTC7Q8NI37 304 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 ZNF599Q96NL3 588 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 SLC2A13Q96QE2 648 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 RNF39Q9H2S5 420 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 ATP13A3Q9H7F0 1226 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 SNTG1Q9NSN8 517 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 TOR4AQ9NXH8 423 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 MOSPD1Q9UJG1 213 aa13.71□□□□□ -0.22
HMGA2-204ENST00000403681 A0A1W2PQH9 124 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 HAT1O14929 419 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 ACOX3O15254 700 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 PAPSS2O95340 614 aaPredicted RBP13.7□□□□□ -0.22
HMGA2-204ENST00000403681 FPR1P21462 350 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 RAPSNQ13702 412 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 SMU1Q2TAY7 513 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 EPHX4Q8IUS5 362 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 OR6Q1Q8NGQ2 317 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 BCL7BQ9BQE9 202 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 C14orf119Q9NWQ9 140 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 KCNH4Q9UQ05 1017 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 OR6C70A6NIJ9 312 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 BTN3A3O00478 584 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
HMGA2-204ENST00000403681 UPK1BO75841 260 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 SNX4O95219 450 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 APLP1P51693 650 aa13.7□□□□□ -0.22
HMGA2-204ENST00000403681 RPS14P62263 151 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms